Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400030470 | Potato | cytosol | 5.19 | 93.75 |
| PGSC0003DMT400029834 | Potato | cytosol | 5.1 | 92.19 |
| Solyc03g058380.2.1 | Tomato | nucleus | 56.57 | 85.94 |
| PGSC0003DMT400033284 | Potato | cytosol | 9.34 | 75.52 |
| AT2G27700.2 | Thale cress | cytosol | 29.5 | 71.04 |
| CDY49760 | Canola | plastid | 25.35 | 67.2 |
| GSMUA_Achr5P09710_001 | Banana | cytosol | 46.97 | 60.54 |
| Solyc06g054400.2.1 | Tomato | nucleus | 56.75 | 57.49 |
| TraesCS7B01G382100.1 | Wheat | cytosol | 23.79 | 52.99 |
| PGSC0003DMT400011181 | Potato | cytosol, mitochondrion | 12.54 | 52.54 |
| CDY45947 | Canola | nucleus | 51.3 | 51.7 |
| CDY33673 | Canola | cytosol | 43.86 | 50.3 |
| CDX96600 | Canola | cytosol | 43.43 | 50.15 |
| KRG88874 | Soybean | cytosol | 16.78 | 50.13 |
| CDY20385 | Canola | nucleus | 51.9 | 49.3 |
| Bra016430.1-P | Field mustard | cytosol | 44.12 | 49.28 |
| Bra008279.1-P | Field mustard | nucleus | 52.6 | 47.95 |
| Os05t0592600-01 | Rice | nucleus | 49.57 | 47.47 |
| VIT_18s0076g00310.t01 | Wine grape | nucleus | 54.93 | 46.97 |
| AT1G76810.1 | Thale cress | nucleus | 51.9 | 46.37 |
| KXG22680 | Sorghum | nucleus | 51.04 | 45.63 |
| HORVU1Hr1G094740.1 | Barley | nucleus | 50.87 | 45.62 |
| Zm00001d009749_P001 | Maize | nucleus | 50.95 | 45.55 |
| TraesCS1A01G438600.2 | Wheat | nucleus | 50.61 | 45.31 |
| AT1G21160.1 | Thale cress | cytosol | 42.56 | 45.05 |
| TraesCS1D01G446400.1 | Wheat | golgi | 50.35 | 44.91 |
| TraesCS1B01G472500.1 | Wheat | nucleus | 50.26 | 44.69 |
| KRG91641 | Soybean | nucleus | 51.99 | 44.35 |
| AT1G76720.2 | Thale cress | cytosol | 46.37 | 43.79 |
| KRH35157 | Soybean | nucleus | 50.61 | 43.53 |
| OQU79180 | Sorghum | nucleus | 32.18 | 43.31 |
| TraesCS7A01G479800.2 | Wheat | mitochondrion, plastid | 29.84 | 41.62 |
| TraesCS1D01G446900.2 | Wheat | nucleus | 48.96 | 40.31 |
| CDX81961 | Canola | cytosol | 9.26 | 36.27 |
| CDX81960 | Canola | cytosol | 8.3 | 34.41 |
| CDY13882 | Canola | cytosol | 8.48 | 33.33 |
| Bra031112.1-P | Field mustard | cytosol | 8.48 | 33.33 |
| GSMUA_Achr1P05220_001 | Banana | nucleus | 43.51 | 27.71 |
| CDY13881 | Canola | cytosol | 10.64 | 27.09 |
| Bra031113.1-P | Field mustard | cytosol | 10.55 | 26.87 |
| Solyc08g081900.2.1 | Tomato | mitochondrion | 10.55 | 16.58 |
| Solyc07g056020.2.1 | Tomato | nucleus, plastid | 13.93 | 15.94 |
Protein Annotations
| MapMan:17.4.3.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.10050 | Gene3D:3.40.50.300 | ncoils:Coil | InterPro:EFTu-like_2 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | InterPro:IPR000795 | InterPro:IPR036925 | UniProt:K4BGN7 | InterPro:P-loop_NTPase | PFAM:PF00009 |
| PFAM:PF03144 | PFAM:PF11987 | PRINTS:PR00315 | PFscan:PS51722 | PANTHER:PTHR43381 | PANTHER:PTHR43381:SF4 |
| SUPFAM:SSF50447 | SUPFAM:SSF52156 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | EnsemblPlantsGene:Solyc03g058350.2 | EnsemblPlants:Solyc03g058350.2.1 |
| InterPro:TF_GTP-bd_dom | InterPro:TIF_IF2 | InterPro:TIF_IF2_dom3 | InterPro:TIF_IF2_dom3_sf | TIGRFAMs:TIGR00231 | InterPro:Transl_B-barrel_sf |
| UniParc:UPI0002768AF3 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:23953086..23964242
Molecular Weight (calculated)
127653.0 Da
IEP (calculated)
4.723
GRAVY (calculated)
-0.655
Length
1156 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGRKKTTEEN PEPPKHGGGG GKSKKKNRMI ADDEYSVQTE EPTVQEDTVL DDDDRKKPAK QGGGKSRKKN VVIDDDDEYT VATEEPVVLE EKVILGGKKK
0101: AKKGKKGASN YGDDLTRDND QEDEGIAPFS GKLNKSKQGQ ARASVFSTVF DTIGDEESEE DKEPVVAGGM GKTIGNSFSV ALLDEEEEAD TSVSKFETET
0201: VEEDDAPELI FAGKKKSSKK KKKIAVKEED EPEQASQAVN PEEEADDDES KKQQRDVPET SKNKTKKKKG GRTVQEDEDE IDKILAELGE EAAPAPSEEK
0301: VQAQLESKDN KSKKKKSGRA AQEEDDIDKI LAEIGEGPLA TSAPTPSLAQ EEEGQLQPQL GDAAAEKEAI EEGAMESAAA KKKKKKKEKE KEKKAAAEES
0401: IEIPEVKEHH QEIVSEVDSV ETEKVEDVDS TITEEKSEIA DAEENEVEEE EEDDEEWDAK SWDDADLKLP GKSAFEDEEV DSEPQPITKK EIKVASSAVN
0501: GAATLPVAAK SVIPTQKTAA AVPGPLKIDR RRKGEPEDRN VEQNKQKGSP EEPGAPNQNE DNLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ
0601: QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSG LCDIAILVVD IMHGLEPQTI ESLNLLKMRN TEFIVALNKV DRLYGWKVCK
0701: NAPIVKAMKQ QSKDVQFEYN TRLTQIVTQF KEQGINTELY YKNKEMGKDT FSIVPTSAIS GEGIPDMLLL LVQWTQKTMI ERLTYSNVVQ CTVLEVKVVE
0801: GHGTTIDVVL VNGVLHEGDQ IVVCGMQGPI VTTIRALLTP HPMKELRVKG TYLHHKEIKA AQGIKITAQG FEHAIAGTSL YVVGPDDDVE DIKEAAMEDM
0901: KSVMSRIDKS GEGVYVQAST LGSLEALLEF LKTPEVSIPV SGIGIGPVHK KDVMKASVML EKKKEYATIL AFDVKVTQEA RELSDELGVK VFMADIIYHL
1001: FDQFKAYIDT IKEEKKKEVA EEAVFPCVLK IVPNCVFNKK DPIVLGVDVL EGIVRIGSPI CIPQKEFIDI GRIASIENNH KPVDSAKKGQ RVAIKIVGFN
1101: PEEQQKMFGR HFEMEDELVS KISRRSIDIL KANFRKDLSV EDWRLVMKLK TLFKIQ
0101: AKKGKKGASN YGDDLTRDND QEDEGIAPFS GKLNKSKQGQ ARASVFSTVF DTIGDEESEE DKEPVVAGGM GKTIGNSFSV ALLDEEEEAD TSVSKFETET
0201: VEEDDAPELI FAGKKKSSKK KKKIAVKEED EPEQASQAVN PEEEADDDES KKQQRDVPET SKNKTKKKKG GRTVQEDEDE IDKILAELGE EAAPAPSEEK
0301: VQAQLESKDN KSKKKKSGRA AQEEDDIDKI LAEIGEGPLA TSAPTPSLAQ EEEGQLQPQL GDAAAEKEAI EEGAMESAAA KKKKKKKEKE KEKKAAAEES
0401: IEIPEVKEHH QEIVSEVDSV ETEKVEDVDS TITEEKSEIA DAEENEVEEE EEDDEEWDAK SWDDADLKLP GKSAFEDEEV DSEPQPITKK EIKVASSAVN
0501: GAATLPVAAK SVIPTQKTAA AVPGPLKIDR RRKGEPEDRN VEQNKQKGSP EEPGAPNQNE DNLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ
0601: QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSG LCDIAILVVD IMHGLEPQTI ESLNLLKMRN TEFIVALNKV DRLYGWKVCK
0701: NAPIVKAMKQ QSKDVQFEYN TRLTQIVTQF KEQGINTELY YKNKEMGKDT FSIVPTSAIS GEGIPDMLLL LVQWTQKTMI ERLTYSNVVQ CTVLEVKVVE
0801: GHGTTIDVVL VNGVLHEGDQ IVVCGMQGPI VTTIRALLTP HPMKELRVKG TYLHHKEIKA AQGIKITAQG FEHAIAGTSL YVVGPDDDVE DIKEAAMEDM
0901: KSVMSRIDKS GEGVYVQAST LGSLEALLEF LKTPEVSIPV SGIGIGPVHK KDVMKASVML EKKKEYATIL AFDVKVTQEA RELSDELGVK VFMADIIYHL
1001: FDQFKAYIDT IKEEKKKEVA EEAVFPCVLK IVPNCVFNKK DPIVLGVDVL EGIVRIGSPI CIPQKEFIDI GRIASIENNH KPVDSAKKGQ RVAIKIVGFN
1101: PEEQQKMFGR HFEMEDELVS KISRRSIDIL KANFRKDLSV EDWRLVMKLK TLFKIQ
0001: MGRKKPSARG GDAEQQPPAS SLVGATKSKK KGAQIDDDEY SIGTELSEES KVEEEKVVVI TGKKKGKKGN KKGTQQDDDD DFSDKVSAAG VKDDVPEIAF
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ
Arabidopsis Description
Eukaryotic translation initiation factor 2 (eIF-2) family protein [Source:UniProtKB/TrEMBL;Acc:F4I420]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.