CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031113.1-P	Field mustard	cytosol	88.55	88.55
CDX81961	Canola	cytosol	53.08	81.69
CDX81960	Canola	cytosol	22.47	36.56
CDY13882	Canola	cytosol	21.81	33.67
PGSC0003DMT400030470	Potato	cytosol	4.41	31.25
PGSC0003DMT400029834	Potato	cytosol	4.41	31.25
PGSC0003DMT400033284	Potato	cytosol	8.59	27.27
PGSC0003DMT400011181	Potato	cytosol, mitochondrion	15.2	25.0
TraesCS7B01G382100.1	Wheat	cytosol	20.26	17.73
PGSC0003DMT400071616	Potato	cytosol	25.55	16.55
Solyc03g058380.2.1	Tomato	nucleus	26.65	15.9
GSMUA_Achr5P09710_001	Banana	cytosol	26.87	13.6
TraesCS7A01G479800.2	Wheat	mitochondrion, plastid	23.57	12.91
CDY33673	Canola	cytosol	25.99	11.71
OQU79180	Sorghum	nucleus	21.81	11.53
CDY45947	Canola	nucleus	28.63	11.33
CDX96600	Canola	cytosol	23.57	10.69
Solyc03g058350.2.1	Tomato	nucleus	27.09	10.64
Solyc06g054400.2.1	Tomato	nucleus	26.65	10.6
CDY20385	Canola	nucleus	28.41	10.6
Os05t0592600-01	Rice	nucleus	27.53	10.36
Zm00001d009749_P001	Maize	nucleus	27.97	9.82
KXG22680	Sorghum	nucleus	27.97	9.82
HORVU1Hr1G094740.1	Barley	nucleus	27.31	9.62
TraesCS1B01G472500.1	Wheat	nucleus	27.53	9.62
TraesCS1D01G446400.1	Wheat	golgi	27.31	9.57
TraesCS1A01G438600.2	Wheat	nucleus	27.09	9.53
KRG91641	Soybean	nucleus	28.19	9.45
VIT_18s0076g00310.t01	Wine grape	nucleus	27.75	9.32
KRH35157	Soybean	nucleus	27.31	9.23
PGSC0003DMT400079119	Potato	nucleus	26.87	9.12
TraesCS1D01G446900.2	Wheat	nucleus	27.09	8.76
CDY25276	Canola	mitochondrion	13.66	8.42
CDY49760	Canola	plastid	7.93	8.26
CDY05134	Canola	mitochondrion	13.22	8.19
CDX90791	Canola	mitochondrion	13.22	8.19
CDY26262	Canola	cytosol	11.89	8.14
KRG88874	Soybean	cytosol	6.83	8.01
PGSC0003DMT400013995	Potato	nucleus	20.26	7.11
GSMUA_Achr1P05220_001	Banana	nucleus	25.77	6.45
CDX94227	Canola	mitochondrion, plastid	7.49	6.1
CDX83919	Canola	plastid	12.78	6.0
CDY48480	Canola	plastid	12.56	5.92
CDX96781	Canola	plastid	12.56	5.78

Protein Annotations

KEGG:00220+6.3.2.-	KEGG:00261+6.3.2.-	KEGG:00380+6.3.2.-	MapMan:15.5.16	Gene3D:2.40.30.10	Gene3D:3.30.2160.10
Gene3D:3.40.50.10050	GO:A0A078FL73	UniProt:A0A078FL73	EnsemblPlants:CDY13881	ProteinID:CDY13881	ProteinID:CDY13881.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00078332001	InterPro:HECT_dom	InterPro:Hect_E3_ubiquitin_ligase	InterPro:IPR000569	InterPro:IPR000571	InterPro:IPR036925
PFAM:PF00632	PFAM:PF11987	PFAM:PF16543	PFscan:PS50103	PANTHER:PTHR43381	PANTHER:PTHR43381:SF4
SUPFAM:SSF50447	SUPFAM:SSF52156	SUPFAM:SSF56204	InterPro:TIF_IF2	InterPro:TIF_IF2_dom3	InterPro:TIF_IF2_dom3_sf
InterPro:Transl_B-barrel_sf	UniPathway:UPA00143	UniParc:UPI0004EEB55A	InterPro:ZC3H15/TMA46_C	InterPro:Znf_CCCH	:

Description

BnaA09g43830DBnaA09g43830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FL73]

Coordinates

chrLK032038:+:763744..768630

Molecular Weight (calculated)

51152.3 Da

IEP (calculated)

4.907

GRAVY (calculated)

-0.271

Length

454 amino acids

Sequence
(BLAST)

001: MLICLEDIKE TESALYKSFK EMLDLEEHAI DDDLTFDIEI LKGKKLSLKE LCEDSSSTNV TMENVCKYFL DAVEKKQYGW FWACPNGGKE CHYRHALPPG
101: YILKSQMKAL LEEESQKMPV EEEIENEHAK LKTATQMTPA LFMEWKKKKI AESRESMHAA LSVTRLMDRD GRTTSNYSGE ESSGTAKREE DFESFGKEIY
201: VDFKRSGEGV LAVASTTYSL NELVEFLESP TVKIPVGALD LGTITPVEIW KAFELSDRKR HFSTVLAFDV DVTPEAIKLA EQLHVKVICG GMLESLHDQF
301: KEHIEEQGED PKMEDEAIFP GILSILPNAV FSKEDPIVLG VLVVEGFIKV GVPISYVRTA GCLDLGRIAW IEKHHQPVDV ASLGDTVIIK IVASNPEEKR
401: QALSFGSHYD TSDDILVTRI SRGSIFALRD HHKDKLSFTD VKVLSDLKRV LNIK

Best Arabidopsis Sequence Match ( AT1G21160.1 )
(BLAST)

0001: MDPRNSSAWG GGDGLPLISS MGGVESKNRC CVTDDDGSIG TKLCEKPKAE EIDFSARKKK LKSKKGGSVS FALLDVEDDK EEAEDGDDKN PSIRSDEVVG
0101: ETSMSKKKKK DKSGKHGVCE EDDDADKILA QHGITTTVST GPEAEIALAQ PEQVASADGA VDKDGEEKTV ESATAKKKKK KKDKDKKASA SLAISSVEAK
0201: EDRQGKKDVK IKVAEKKVPK HVREKQETLA RWKEAEDGKK KEEEERLRKE EEERRIEEER EREAEEIRQK RKIRKMEKKQ EGLILTAKQK RDAAKNEAFR
0301: KRVLTDAGSL LVADKNGDSS KRPIYGNKNK LACKKANDPA SVQAKGDGET KENHAADEPC TLPDLVSVED RRVGIIESVD TEETHESVDV SQENGDEEDV
0401: WDAKTNFTIK GDSDDEEEKP QPVFKKGLKD TASKAHDSVP GADRPTVKPG GSGKPKTAAK KAMPKVDDTT RPKDTSKKDE GLVLNELAKE VEENLRSPIC
0501: CIMGHVDSGK TKLLDCIRGT NVQEGEAGGI TQQIGATFFP AENIRERTKE LQANAKLKVP GILVIDTPGH ESFTNLRSRG SNLCDLAILV VDIMRGLEPQ
0601: TIESLNLLRR RNVKFIIALN KVDRLYGWEK SKNAPIRKTM MQQTGDVVKE FKMRLNRVQN QFQEQGLNSM LYYKNREMGE TISILPASAI SGEGIPDLLL
0701: FLVQWAQKTM VEKLTYVDKV QCTVLEVKVI EGHGITVDVV LVNGVLREGD QIVVCGSQGP IVTTIRSLLT PYPMNEMRVT GTYMPHREVK AAQGIKIAAQ
0801: GLEHAIAGTA LHVIGPNEDM EEAKKNAMED IESVMNRIDK SGEGVYVQAS TLGSLEALLE FLKSSDVKIP VSGIGIGPVH KKDIMKAGVM LEKKKEFATI
0901: LAFDVKISAE ARELADKMGV KIFCDDTIYC LFDKFKSYIE GIKEEKKKET ACEAVFPCIL QILPNHIYNQ RDPIILGVKV NDGILKVGTP ICIVKRIENV
1001: RVFMDIGRVS SIKNNNNMPV DYARKGQEVA IKIIASNPEE QKMFGRHFGV DDRLISHISS RSVDVIRTNY WNELSNDEKD LVLRLKRIFK IQ

Arabidopsis Description

Eukaryotic translation initiation factor 2 (eIF-2) family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.