Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26262 | Canola | cytosol | 61.97 | 92.16 |
| Bra016612.1-P | Field mustard | plastid | 86.31 | 83.35 |
| CDX83919 | Canola | plastid | 80.73 | 82.4 |
| CDY48480 | Canola | plastid | 79.41 | 81.31 |
| AT1G17220.1 | Thale cress | plastid | 82.15 | 78.95 |
| Os05t0575300-02 | Rice | cytosol | 40.97 | 72.27 |
| KRH43837 | Soybean | nucleus, plastid | 65.01 | 63.47 |
| KRH13635 | Soybean | nucleus | 64.81 | 62.96 |
| VIT_19s0027g00130.t01 | Wine grape | plastid | 64.1 | 62.27 |
| PGSC0003DMT400079833 | Potato | plastid | 62.47 | 61.17 |
| Solyc07g056020.2.1 | Tomato | nucleus, plastid | 62.27 | 60.79 |
| GSMUA_Achr3P23270_001 | Banana | plastid | 55.17 | 55.97 |
| KXG22198 | Sorghum | plastid | 54.67 | 55.28 |
| GSMUA_Achr8P07210_001 | Banana | plastid | 53.96 | 54.9 |
| HORVU7Hr1G060530.1 | Barley | plastid | 53.35 | 54.62 |
| TraesCS7D01G288700.1 | Wheat | plastid | 53.14 | 54.41 |
| TraesCS7A01G287900.1 | Wheat | plastid | 32.96 | 47.94 |
| TraesCS7B01G183700.2 | Wheat | plastid | 32.76 | 47.64 |
| Zm00001d017588_P001 | Maize | plastid | 19.98 | 46.79 |
| CDX94227 | Canola | mitochondrion, plastid | 18.36 | 32.5 |
| CDY25276 | Canola | mitochondrion | 23.43 | 31.39 |
| CDY05134 | Canola | mitochondrion | 23.02 | 30.97 |
| CDX90791 | Canola | mitochondrion | 22.52 | 30.29 |
| CDY49760 | Canola | plastid | 7.51 | 16.97 |
| CDY33673 | Canola | cytosol | 15.92 | 15.58 |
| CDX96600 | Canola | cytosol | 15.62 | 15.38 |
| CDX81961 | Canola | cytosol | 4.06 | 13.56 |
| CDY45947 | Canola | nucleus | 15.62 | 13.43 |
| CDX81960 | Canola | cytosol | 3.65 | 12.9 |
| CDY20385 | Canola | nucleus | 15.72 | 12.74 |
| CDY13881 | Canola | cytosol | 5.78 | 12.56 |
| CDY13882 | Canola | cytosol | 3.65 | 12.24 |
Protein Annotations
| MapMan:17.7.3.3 | Gene3D:2.40.30.10 | Gene3D:3.40.50.10050 | Gene3D:3.40.50.300 | GO:A0A078E6C0 | EnsemblPlants:CDX96781 |
| ProteinID:CDX96781 | ProteinID:CDX96781.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003743 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00103011001 |
| InterPro:IPR000795 | InterPro:IPR036925 | HAMAP:MF_00100_B | InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF11987 |
| PRINTS:PR00315 | ScanProsite:PS01176 | PFscan:PS51722 | PANTHER:PTHR43381 | PANTHER:PTHR43381:SF5 | SUPFAM:SSF50447 |
| SUPFAM:SSF52156 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | InterPro:Small_GTP-bd_dom | InterPro:TF_GTP-bd_dom | InterPro:TF_IF2_bacterial-like |
| InterPro:TIF_IF2 | InterPro:TIF_IF2_dom3 | InterPro:TIF_IF2_dom3_sf | TIGRFAMs:TIGR00231 | TIGRFAMs:TIGR00487 | InterPro:Transl_B-barrel_sf |
| UniParc:UPI0004EF373B | SEG:seg | : | : | : | : |
Description
BnaA08g23240D
Coordinates
chrLK031895:-:954377..959582
Molecular Weight (calculated)
105549.0 Da
IEP (calculated)
6.008
GRAVY (calculated)
-0.280
Length
986 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSMLVLVGT MPSLASLVSP GGGGCGASVY ASYALVKRVS LPRRSVKGAK KWLCRYSLSS STTTSTTDFI AESNSAVSID SHSFKASIEG DESDIVLKQA
101: PKPVLKPPVA RVERGLGVSS APWNKDISNG GKFDGEEERS KVIESLGEVL DKAERLEIPK PVSKEGGEGF KPSQPSGSSS NSKGDGFGTR KTKTMKSVWR
201: KGDAVAAVQK VVKESPKIDN KGMQKPILKD HGMATRPSGP ILKDVGMASK PSVSEEVDSS SQSKERKPIL VDKFASKKKG VDPVASQTVL APTKPGKGPP
301: SNKLRFEQRN KKNASANPRR RMAAEDDADE DASELNVSIP GKGRKGRKWS KASRKAVRLQ AARDTAPVKA EILEVEEEGM SIEDLAYNLA IGEGDILGYL
401: YSKGIRPDGV QTLDREMVRM ICRDYDVEVL DADSVQVEEM AKKKEIFDEE DLDKLEDRPP VITIMGHVDH GKTTLLDYIR KSKVAASEAG GITQGIGAYK
501: VSVPVDGKLQ SCVFLDTPGH EAFGAMRARG ARVTDIAIIV VAADDGIRPQ TNEAIAHAKA AGVPIVIAIN KIDKDGASPE RVMQELSSIG LMPEDWGGDV
601: PMVQISALKG ENIDDLLETV MLVAELQELK ANPHRNAKGI VIEAGLDKAK GPFATFIVQK GTLRKGDVVV CGEAFGKVRA LFDHSGERVD EAGPSIPVQV
701: IGLNNVPIAG DEFEIVSSLD VAREMAEARA VSLRDERISA KAGDGKVTLS SLASAVSAKK MSGLDLHQLN IILKVDVQGS IEAVKQALQV LPQENVTLKF
801: LLQATGDVSN SDVDLASASE AIIFGFNVKA SGSVKKDAEN KGVEIRLYRV IYELIDDVRN AMEGLLESVE EQIPIGSAEV RATFSSGSGR VAGCMVNEGK
901: FVKDCGIRVI RKGKTVHVGV LDSLKRVKEN VKEVSAGLEC GIGMDDYDDW IEGDTIEAFN AVQKRRTLEE ASASMSAAIE EAGVEL
101: PKPVLKPPVA RVERGLGVSS APWNKDISNG GKFDGEEERS KVIESLGEVL DKAERLEIPK PVSKEGGEGF KPSQPSGSSS NSKGDGFGTR KTKTMKSVWR
201: KGDAVAAVQK VVKESPKIDN KGMQKPILKD HGMATRPSGP ILKDVGMASK PSVSEEVDSS SQSKERKPIL VDKFASKKKG VDPVASQTVL APTKPGKGPP
301: SNKLRFEQRN KKNASANPRR RMAAEDDADE DASELNVSIP GKGRKGRKWS KASRKAVRLQ AARDTAPVKA EILEVEEEGM SIEDLAYNLA IGEGDILGYL
401: YSKGIRPDGV QTLDREMVRM ICRDYDVEVL DADSVQVEEM AKKKEIFDEE DLDKLEDRPP VITIMGHVDH GKTTLLDYIR KSKVAASEAG GITQGIGAYK
501: VSVPVDGKLQ SCVFLDTPGH EAFGAMRARG ARVTDIAIIV VAADDGIRPQ TNEAIAHAKA AGVPIVIAIN KIDKDGASPE RVMQELSSIG LMPEDWGGDV
601: PMVQISALKG ENIDDLLETV MLVAELQELK ANPHRNAKGI VIEAGLDKAK GPFATFIVQK GTLRKGDVVV CGEAFGKVRA LFDHSGERVD EAGPSIPVQV
701: IGLNNVPIAG DEFEIVSSLD VAREMAEARA VSLRDERISA KAGDGKVTLS SLASAVSAKK MSGLDLHQLN IILKVDVQGS IEAVKQALQV LPQENVTLKF
801: LLQATGDVSN SDVDLASASE AIIFGFNVKA SGSVKKDAEN KGVEIRLYRV IYELIDDVRN AMEGLLESVE EQIPIGSAEV RATFSSGSGR VAGCMVNEGK
901: FVKDCGIRVI RKGKTVHVGV LDSLKRVKEN VKEVSAGLEC GIGMDDYDDW IEGDTIEAFN AVQKRRTLEE ASASMSAAIE EAGVEL
0001: MPSMLVLVGT MPSLASLVSL GGACASVSGT SSSDASYALV KRVSLSRRSV KGTKKWLCRY SVSSSTTTTT ADFIADQNNN SVSIDSNSFR GSKDGDDSEV
0101: VLKQTPKPVL KPPVARVERG LGVNTAPWSK DLSNGGKFDG EEERNKVIES LGEVLDKAEK LEIPKPGNKE GGEAVKPSQP SANSSNSRNG SYANASDGGT
0201: RKTKTMKSVW RKGDAVAAVQ KVVKESPKIF NRGVQTEPRT REEGEVNAKA GTPLAPPQPP FRPQPPVRPQ PMLQGKPMVA PPVKKSPILK DLGMAAKPLV
0301: SEEVDSSVKS KERKPILVDK FASKKKGVDP AASQAVLAPT KPGKGPPSNK FRVEHRNKKN ASASPRRRIV AEDDGDDDAS ISRSGRKGRK WSKASRKAVR
0401: LQAAKDAAPV KAEILEVEEE GMSIEDLAYN LAIGEGDILG YLYSKGIRPD GVHTLDREMV KMICRDYDVE VLDADSVKVE EMAKKRQTFD EEDLDKLEDR
0501: PPVITIMGHV DHGKTTLLDY IRKSKVAASE AGGITQGIGA YKVSVPVDGK LQSCVFLDTP GHEAFGAMRA RGARVTDIAI IVVAADDGIR PQTNEAIAHA
0601: KAAAVPIVIA INKIDKEGAS PDRVMQELSS IGLMPEDWGG DVPMVQISAL KGENVDDLLE TVMLVAELQE LKANPHRNAK GIVIEAGLDK AKGPFATFIV
0701: QKGTLKRGDV VVCGEAFGKV RALFDHSGER VDEAGPSIPV QVIGLNNVPI AGDEFEIVSS LDVAREMAEA RAVSLRDERI SAKAGDGKVT LSSLASAVSA
0801: KKMSGLDLHQ LNIILKVDVQ GSIEAVRQAL QVLPQENVTL KFLLQATGDV SNSDVDLASA SEAIVFGFNV KASGSVKKAA ENKGVEIRLY RVIYELIDDV
0901: RNAMEGLLES VEEQIPIGSA EVRATFSSGS GRVAGCMVNE GKFVKDCGIR VVRKGKTVHV GVLDSLKRVK ENVKEVSAGL ECGIGMDDYD DWIEGDIIEA
1001: FNAVQKRRTL EEASASMSAA IEEAGV
0101: VLKQTPKPVL KPPVARVERG LGVNTAPWSK DLSNGGKFDG EEERNKVIES LGEVLDKAEK LEIPKPGNKE GGEAVKPSQP SANSSNSRNG SYANASDGGT
0201: RKTKTMKSVW RKGDAVAAVQ KVVKESPKIF NRGVQTEPRT REEGEVNAKA GTPLAPPQPP FRPQPPVRPQ PMLQGKPMVA PPVKKSPILK DLGMAAKPLV
0301: SEEVDSSVKS KERKPILVDK FASKKKGVDP AASQAVLAPT KPGKGPPSNK FRVEHRNKKN ASASPRRRIV AEDDGDDDAS ISRSGRKGRK WSKASRKAVR
0401: LQAAKDAAPV KAEILEVEEE GMSIEDLAYN LAIGEGDILG YLYSKGIRPD GVHTLDREMV KMICRDYDVE VLDADSVKVE EMAKKRQTFD EEDLDKLEDR
0501: PPVITIMGHV DHGKTTLLDY IRKSKVAASE AGGITQGIGA YKVSVPVDGK LQSCVFLDTP GHEAFGAMRA RGARVTDIAI IVVAADDGIR PQTNEAIAHA
0601: KAAAVPIVIA INKIDKEGAS PDRVMQELSS IGLMPEDWGG DVPMVQISAL KGENVDDLLE TVMLVAELQE LKANPHRNAK GIVIEAGLDK AKGPFATFIV
0701: QKGTLKRGDV VVCGEAFGKV RALFDHSGER VDEAGPSIPV QVIGLNNVPI AGDEFEIVSS LDVAREMAEA RAVSLRDERI SAKAGDGKVT LSSLASAVSA
0801: KKMSGLDLHQ LNIILKVDVQ GSIEAVRQAL QVLPQENVTL KFLLQATGDV SNSDVDLASA SEAIVFGFNV KASGSVKKAA ENKGVEIRLY RVIYELIDDV
0901: RNAMEGLLES VEEQIPIGSA EVRATFSSGS GRVAGCMVNE GKFVKDCGIR VVRKGKTVHV GVLDSLKRVK ENVKEVSAGL ECGIGMDDYD DWIEGDIIEA
1001: FNAVQKRRTL EEASASMSAA IEEAGV
Arabidopsis Description
FUG1Translation initiation factor IF-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SHI1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.