Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45947 | Canola | nucleus | 80.03 | 84.92 |
| PGSC0003DMT400030470 | Potato | cytosol | 4.11 | 78.12 |
| PGSC0003DMT400029834 | Potato | cytosol | 4.03 | 76.56 |
| Bra008279.1-P | Field mustard | nucleus | 78.72 | 75.55 |
| AT2G27700.2 | Thale cress | cytosol | 29.33 | 74.38 |
| CDY49760 | Canola | plastid | 26.46 | 73.85 |
| Solyc03g058380.2.1 | Tomato | nucleus | 43.55 | 69.65 |
| PGSC0003DMT400071616 | Potato | cytosol | 39.61 | 68.76 |
| GSMUA_Achr5P09710_001 | Banana | cytosol | 49.96 | 67.78 |
| PGSC0003DMT400033284 | Potato | cytosol | 7.72 | 65.73 |
| AT1G76810.1 | Thale cress | nucleus | 68.2 | 64.14 |
| CDX96600 | Canola | cytosol | 49.06 | 59.64 |
| CDY33673 | Canola | cytosol | 49.38 | 59.62 |
| AT1G76720.2 | Thale cress | cytosol | 57.27 | 56.94 |
| Solyc06g054400.2.1 | Tomato | nucleus | 52.59 | 56.09 |
| Os05t0592600-01 | Rice | nucleus | 52.83 | 53.27 |
| KRG91641 | Soybean | nucleus | 58.26 | 52.32 |
| TraesCS7B01G382100.1 | Wheat | cytosol | 22.27 | 52.22 |
| Solyc03g058350.2.1 | Tomato | nucleus | 49.3 | 51.9 |
| VIT_18s0076g00310.t01 | Wine grape | nucleus | 57.11 | 51.41 |
| TraesCS1A01G438600.2 | Wheat | nucleus | 53.99 | 50.89 |
| HORVU1Hr1G094740.1 | Barley | nucleus | 53.66 | 50.66 |
| TraesCS1D01G446400.1 | Wheat | golgi | 53.66 | 50.39 |
| KXG22680 | Sorghum | nucleus | 53.41 | 50.27 |
| TraesCS1B01G472500.1 | Wheat | nucleus | 53.57 | 50.15 |
| Zm00001d009749_P001 | Maize | nucleus | 53.16 | 50.04 |
| KRH35157 | Soybean | nucleus | 54.07 | 48.96 |
| PGSC0003DMT400079119 | Potato | nucleus | 53.33 | 48.54 |
| PGSC0003DMT400013995 | Potato | nucleus | 51.44 | 48.38 |
| KRG88874 | Soybean | cytosol | 15.37 | 48.32 |
| PGSC0003DMT400011181 | Potato | cytosol, mitochondrion | 10.6 | 46.74 |
| TraesCS1D01G446900.2 | Wheat | nucleus | 53.33 | 46.23 |
| OQU79180 | Sorghum | nucleus | 31.31 | 44.35 |
| TraesCS7A01G479800.2 | Wheat | mitochondrion, plastid | 29.01 | 42.58 |
| CDX81961 | Canola | cytosol | 9.37 | 38.64 |
| CDX81960 | Canola | cytosol | 8.38 | 36.56 |
| CDY13882 | Canola | cytosol | 8.55 | 35.37 |
| GSMUA_Achr1P05220_001 | Banana | nucleus | 50.53 | 33.88 |
| CDY13881 | Canola | cytosol | 10.6 | 28.41 |
| CDY26262 | Canola | cytosol | 10.85 | 19.91 |
| CDX94227 | Canola | mitochondrion, plastid | 9.04 | 19.75 |
| CDY25276 | Canola | mitochondrion | 11.67 | 19.29 |
| CDY05134 | Canola | mitochondrion | 11.09 | 18.42 |
| CDX90791 | Canola | mitochondrion | 11.01 | 18.28 |
| CDY48480 | Canola | plastid | 13.15 | 16.61 |
| CDX83919 | Canola | plastid | 13.15 | 16.56 |
| CDX96781 | Canola | plastid | 12.74 | 15.72 |
Protein Annotations
| MapMan:17.4.3.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.10050 | Gene3D:3.40.50.300 | GO:A0A078G1F2 | UniProt:A0A078G1F2 |
| EnsemblPlants:CDY20385 | ProteinID:CDY20385 | ProteinID:CDY20385.1 | ncoils:Coil | InterPro:EFTu-like_2 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 |
| EnsemblPlantsGene:GSBRNA2T00012410001 | InterPro:IPR000795 | InterPro:IPR036925 | InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF03144 |
| PFAM:PF11987 | PRINTS:PR00315 | PFscan:PS51722 | PANTHER:PTHR43381 | PANTHER:PTHR43381:SF4 | SUPFAM:SSF50447 |
| SUPFAM:SSF52156 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:TF_GTP-bd_dom | InterPro:TIF_IF2 | InterPro:TIF_IF2_dom3 |
| InterPro:TIF_IF2_dom3_sf | TIGRFAMs:TIGR00231 | InterPro:Transl_B-barrel_sf | UniParc:UPI0004EE9AB1 | SEG:seg | : |
Description
BnaC02g24310DBnaC02g24310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1F2]
Coordinates
chrLK032107:+:256118..261580
Molecular Weight (calculated)
134170.0 Da
IEP (calculated)
4.985
GRAVY (calculated)
-0.736
Length
1217 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGRKKPSARV GDDEPTASSL VVGGAKSKKK SVQIDDDEYS IGTELSEDPP KAEEEKVVIT GKKKSKKGNK KGALQDDEED DVVPEIAFEG KKKKKSKSKK
0101: GGGSVSFALL DDDEVDKDDE DDKVEDEPVI SNKGKKGGNS FAASAFDALG DDDEDDEEAE KDEEEVYPIT FSEETNAVEE EESPEIMFTG KKKSSKKKGS
0201: SVLASLGDDD SMLGNEVAEE ISKDKSAEVV EPAKSKKKKK NKSGRTVQEE DDLDKLLAEL GEGPASGKPA SSQPEEDKVQ AQAQPVAPVE NAGEKEEEEE
0301: SAAAKKRRKK KEKEKEKKAA AATSSKDAKG KAAEKKLPKH VREMQEALAR RQEAEERKKK EEEEKLRKEE EERLRQEELE RQAEEAKRKK KEKEKEKLLR
0401: KKLEGKLLTA KQKSEALKRE AFKNQLLANG GGLPLADEGE PATKRPVYAN KKKSARQKGN DSTSVQVEEE VDPKENHADE PDTLGEVGSA ETEKVDLVES
0501: ADTDEKSGTA DVAAENGAEE DEEEDEWDAK SWGDDVDLKF KGDFDDEEDK AKPVVKKDMK DAVSKTQDSG PETVKPTAKP AGTENPTAPA TKTLPGVDDA
0601: ARGKRATRAK DASKKGKGLA SSEPKEGEEN LRSPICCIMG HVDTGKTKLL DCIRGTNVQE GEAGGITQQI GATYFPAENI RERTRELKAD AKLKVPGLLV
0701: IDTPGHESFT NLRSRGSSLC DLAILVVDIM HGLEPQTIES LNLLRMRDTE FIVALNKMDR LYGWKTCKNA PIVKAMKQQT KDVVNEFNMR LTGIITQFKE
0801: QGLNTELYYK NKEMGETFSI VPTSAITGEG IPDLLLLLVN WAQKTMVEKL TYVDDVQCTV LEVKVIEGHG TTIDVVLVNG VLREGDQIVG PIVTTIRALL
0901: TPHPMKELRV KGTYVHHKEI KAAQGIKITA QGLEHAIAGT ALHVIGPDDD IEAIKEQAME DMESVLSRID KSGEGVYVQA STLGSLEALL EFLKSPAVKI
1001: PVSGIGIGPV HKKDIMKAGV MLERKKEYAT ILAFDVKVTT DARELADEMG VKIFCADIIY HLFDQFKAYI ESIKEEKKKE SADEAVFPCV LRILPNCVFN
1101: KRDPIVLGVD VVEGILKIGT PICVPSREFI DIGRIASIEN NHKPVDYAKK GSQVAIKIIA SNPEEQKMFG RHFDMEDELV SHISRRSIDI LKTNYRDELS
1201: MEEWKIVVKL KNIFKIQ
0101: GGGSVSFALL DDDEVDKDDE DDKVEDEPVI SNKGKKGGNS FAASAFDALG DDDEDDEEAE KDEEEVYPIT FSEETNAVEE EESPEIMFTG KKKSSKKKGS
0201: SVLASLGDDD SMLGNEVAEE ISKDKSAEVV EPAKSKKKKK NKSGRTVQEE DDLDKLLAEL GEGPASGKPA SSQPEEDKVQ AQAQPVAPVE NAGEKEEEEE
0301: SAAAKKRRKK KEKEKEKKAA AATSSKDAKG KAAEKKLPKH VREMQEALAR RQEAEERKKK EEEEKLRKEE EERLRQEELE RQAEEAKRKK KEKEKEKLLR
0401: KKLEGKLLTA KQKSEALKRE AFKNQLLANG GGLPLADEGE PATKRPVYAN KKKSARQKGN DSTSVQVEEE VDPKENHADE PDTLGEVGSA ETEKVDLVES
0501: ADTDEKSGTA DVAAENGAEE DEEEDEWDAK SWGDDVDLKF KGDFDDEEDK AKPVVKKDMK DAVSKTQDSG PETVKPTAKP AGTENPTAPA TKTLPGVDDA
0601: ARGKRATRAK DASKKGKGLA SSEPKEGEEN LRSPICCIMG HVDTGKTKLL DCIRGTNVQE GEAGGITQQI GATYFPAENI RERTRELKAD AKLKVPGLLV
0701: IDTPGHESFT NLRSRGSSLC DLAILVVDIM HGLEPQTIES LNLLRMRDTE FIVALNKMDR LYGWKTCKNA PIVKAMKQQT KDVVNEFNMR LTGIITQFKE
0801: QGLNTELYYK NKEMGETFSI VPTSAITGEG IPDLLLLLVN WAQKTMVEKL TYVDDVQCTV LEVKVIEGHG TTIDVVLVNG VLREGDQIVG PIVTTIRALL
0901: TPHPMKELRV KGTYVHHKEI KAAQGIKITA QGLEHAIAGT ALHVIGPDDD IEAIKEQAME DMESVLSRID KSGEGVYVQA STLGSLEALL EFLKSPAVKI
1001: PVSGIGIGPV HKKDIMKAGV MLERKKEYAT ILAFDVKVTT DARELADEMG VKIFCADIIY HLFDQFKAYI ESIKEEKKKE SADEAVFPCV LRILPNCVFN
1101: KRDPIVLGVD VVEGILKIGT PICVPSREFI DIGRIASIEN NHKPVDYAKK GSQVAIKIIA SNPEEQKMFG RHFDMEDELV SHISRRSIDI LKTNYRDELS
1201: MEEWKIVVKL KNIFKIQ
0001: MGRKKPSARG GDAEQQPPAS SLVGATKSKK KGAQIDDDEY SIGTELSEES KVEEEKVVVI TGKKKGKKGN KKGTQQDDDD DFSDKVSAAG VKDDVPEIAF
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ
Arabidopsis Description
Eukaryotic translation initiation factor 2 (eIF-2) family protein [Source:UniProtKB/TrEMBL;Acc:F4I420]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.