Factsheet for TraesCS7A01G479800.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G382100.1	Wheat	cytosol	54.64	87.28
PGSC0003DMT400030470	Potato	cytosol	4.34	56.25
PGSC0003DMT400029834	Potato	cytosol	4.34	56.25
OQU79180	Sorghum	nucleus	54.04	52.15
AT2G27700.2	Thale cress	cytosol	26.66	46.04
PGSC0003DMT400071616	Potato	cytosol	38.84	45.93
Solyc03g058380.2.1	Tomato	nucleus	39.81	43.36
CDY49760	Canola	plastid	22.2	42.2
GSMUA_Achr5P09710_001	Banana	cytosol	42.58	39.35
KRG88874	Soybean	cytosol	18.34	39.28
PGSC0003DMT400033284	Potato	cytosol	6.63	38.46
CDX96600	Canola	cytosol	39.32	32.57
CDY33673	Canola	cytosol	39.32	32.34
CDX81961	Canola	cytosol	11.46	32.2
Bra016430.1-P	Field mustard	cytosol	39.45	31.59
Solyc06g054400.2.1	Tomato	nucleus	43.18	31.38
CDY45947	Canola	nucleus	42.7	30.86
CDX81960	Canola	cytosol	10.13	30.11
AT1G21160.1	Thale cress	cytosol	39.45	29.95
Solyc03g058350.2.1	Tomato	nucleus	41.62	29.84
PGSC0003DMT400011181	Potato	cytosol, mitochondrion	9.89	29.71
CDY20385	Canola	nucleus	42.58	29.01
TraesCS1A01G438600.2	Wheat	nucleus	44.27	28.43
CDY13882	Canola	cytosol	10.01	28.23
Bra031112.1-P	Field mustard	cytosol	10.01	28.23
Bra008279.1-P	Field mustard	nucleus	42.58	27.84
AT1G76810.1	Thale cress	nucleus	42.82	27.43
PGSC0003DMT400079119	Potato	nucleus	43.67	27.08
VIT_18s0076g00310.t01	Wine grape	nucleus	42.82	26.26
AT1G76720.2	Thale cress	cytosol	38.72	26.23
KRG91641	Soybean	nucleus	42.82	26.2
KRH35157	Soybean	nucleus	41.25	25.45
Bra031113.1-P	Field mustard	cytosol	13.27	24.23
PGSC0003DMT400013995	Potato	nucleus	37.76	24.19
CDY13881	Canola	cytosol	12.91	23.57
TraesCS1A01G331200.1	Wheat	mitochondrion	15.2	17.7
GSMUA_Achr1P05220_001	Banana	nucleus	38.24	17.47
TraesCS7A01G287900.1	Wheat	plastid	11.82	14.45

Protein Annotations

MapMan:17.4.3.2	Gene3D:2.40.30.10	Gene3D:3.40.50.10050	Gene3D:3.40.50.300	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
InterPro:IPR000795	InterPro:IPR036925	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF11987	PRINTS:PR00315
PFscan:PS51722	PANTHER:PTHR43381	PANTHER:PTHR43381:SF2	SUPFAM:SSF50447	SUPFAM:SSF52156	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	InterPro:TIF_IF2	InterPro:TIF_IF2_dom3	InterPro:TIF_IF2_dom3_sf	TIGRFAMs:TIGR00231
EnsemblPlantsGene:TraesCS7A01G479800	EnsemblPlants:TraesCS7A01G479800.2	InterPro:Transl_B-barrel_sf	TIGR:cd01887	SEG:seg	:

Description

No Description!

Coordinates

chr7A:+:672025160..672029330

Molecular Weight (calculated)

91764.1 Da

IEP (calculated)

6.764

GRAVY (calculated)

-0.519

Length

829 amino acids

Sequence
(BLAST)

001: MSSRKTAGPS RAAAGGAKKV ASGARGVSLR ALREGLARQK EEEERRAREQ ELQAQAEEER GRREAEEEEE RRKLREQELK RREEDRQRRR LEERKREESR
101: RAEEARRRLG ITAPLVEGGG AAGVDDGRKK RPVYHSRRPA LKPKTVESEA DVGGDQGSSG VSQEEENSAA LNEALKLGEG SSDGSLEEDR TAIGDDDDEE
201: EDAWDSKSLD EFDVMSAAGN SHSSGSEEDI KEKHVISTAP VVNPDNAVNE IVEDIFDAQD VASGDEKELR APICCILGHV DAGKTKLLDC IRGTHVQERE
301: AGGITQQIGA TYLPAENIRD RTSLKAETAI KVPGLLVIDT PGHESFSKMR SRGLSMCDVA VVVVDITKGL EKQTVESLHL LRRHNVSFIV ALNKVDRLYG
401: WKECTNAPIV EALKKQSDDV KSEYKWRLTK VVTDFKENGF NTAPYYENNK KKKVVNIAPT SAESGEGVPD LLLLLVRWLP DIITDKLAYD DTVECTVLEV
501: NEHKDLGTTV DVVLINGVLR QGDQVIVCTK QGPVTTIIRD LLTPHPMKEL KAKGAYKHHK EVRAGQGVKI VARTCKEGIY VQASSVGTLE AIIAHLKSSS
601: VDIPVYAWNL GPVYKQDVMK ASAMLKRKEE YAVILAFDVK VMPEASALAA ESGLKIITAD TVYRLVNIYT EHIKGLKEAK KMQFAAEAVF PCTLKILPNR
701: VYHSKDPIVC DVEVVEGVVK VGTPICVFTP SKDKSKNIIV HSLGRISSMQ TSNGNQIFSA RNGVVAIKIS GDSPQEKSRS YGRHFDSSNE LVSEISRRSI
801: DVLKECFRDE MRAENWQLIS RLKTQFKIA

Best Arabidopsis Sequence Match ( AT1G21160.1 )
(BLAST)

0001: MDPRNSSAWG GGDGLPLISS MGGVESKNRC CVTDDDGSIG TKLCEKPKAE EIDFSARKKK LKSKKGGSVS FALLDVEDDK EEAEDGDDKN PSIRSDEVVG
0101: ETSMSKKKKK DKSGKHGVCE EDDDADKILA QHGITTTVST GPEAEIALAQ PEQVASADGA VDKDGEEKTV ESATAKKKKK KKDKDKKASA SLAISSVEAK
0201: EDRQGKKDVK IKVAEKKVPK HVREKQETLA RWKEAEDGKK KEEEERLRKE EEERRIEEER EREAEEIRQK RKIRKMEKKQ EGLILTAKQK RDAAKNEAFR
0301: KRVLTDAGSL LVADKNGDSS KRPIYGNKNK LACKKANDPA SVQAKGDGET KENHAADEPC TLPDLVSVED RRVGIIESVD TEETHESVDV SQENGDEEDV
0401: WDAKTNFTIK GDSDDEEEKP QPVFKKGLKD TASKAHDSVP GADRPTVKPG GSGKPKTAAK KAMPKVDDTT RPKDTSKKDE GLVLNELAKE VEENLRSPIC
0501: CIMGHVDSGK TKLLDCIRGT NVQEGEAGGI TQQIGATFFP AENIRERTKE LQANAKLKVP GILVIDTPGH ESFTNLRSRG SNLCDLAILV VDIMRGLEPQ
0601: TIESLNLLRR RNVKFIIALN KVDRLYGWEK SKNAPIRKTM MQQTGDVVKE FKMRLNRVQN QFQEQGLNSM LYYKNREMGE TISILPASAI SGEGIPDLLL
0701: FLVQWAQKTM VEKLTYVDKV QCTVLEVKVI EGHGITVDVV LVNGVLREGD QIVVCGSQGP IVTTIRSLLT PYPMNEMRVT GTYMPHREVK AAQGIKIAAQ
0801: GLEHAIAGTA LHVIGPNEDM EEAKKNAMED IESVMNRIDK SGEGVYVQAS TLGSLEALLE FLKSSDVKIP VSGIGIGPVH KKDIMKAGVM LEKKKEFATI
0901: LAFDVKISAE ARELADKMGV KIFCDDTIYC LFDKFKSYIE GIKEEKKKET ACEAVFPCIL QILPNHIYNQ RDPIILGVKV NDGILKVGTP ICIVKRIENV
1001: RVFMDIGRVS SIKNNNNMPV DYARKGQEVA IKIIASNPEE QKMFGRHFGV DDRLISHISS RSVDVIRTNY WNELSNDEKD LVLRLKRIFK IQ

Arabidopsis Description

Eukaryotic translation initiation factor 2 (eIF-2) family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.