Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400030470 | Potato | cytosol | 9.58 | 71.88 |
| PGSC0003DMT400029834 | Potato | cytosol | 9.38 | 70.31 |
| CDY49760 | Canola | plastid | 56.04 | 61.7 |
| PGSC0003DMT400033284 | Potato | cytosol | 15.62 | 52.45 |
| PGSC0003DMT400071616 | Potato | cytosol | 67.08 | 45.93 |
| Solyc03g058380.2.1 | Tomato | nucleus | 71.25 | 44.94 |
| KRG88874 | Soybean | cytosol | 33.54 | 41.6 |
| GSMUA_Achr5P09710_001 | Banana | cytosol | 67.71 | 36.23 |
| TraesCS7B01G382100.1 | Wheat | cytosol | 38.33 | 35.45 |
| CDY45947 | Canola | nucleus | 74.79 | 31.3 |
| Solyc03g058350.2.1 | Tomato | nucleus | 71.04 | 29.5 |
| AT1G21160.1 | Thale cress | cytosol | 66.88 | 29.4 |
| CDY20385 | Canola | nucleus | 74.38 | 29.33 |
| Solyc06g054400.2.1 | Tomato | nucleus | 69.17 | 29.1 |
| Bra008279.1-P | Field mustard | nucleus | 74.17 | 28.08 |
| OQU79180 | Sorghum | nucleus | 50.21 | 28.06 |
| AT1G76810.1 | Thale cress | nucleus | 75.21 | 27.9 |
| AT1G76720.2 | Thale cress | cytosol | 69.79 | 27.37 |
| TraesCS7A01G479800.2 | Wheat | mitochondrion, plastid | 46.04 | 26.66 |
| VIT_18s0076g00310.t01 | Wine grape | nucleus | 73.33 | 26.04 |
| Os05t0592600-01 | Rice | nucleus | 64.79 | 25.77 |
| PGSC0003DMT400011181 | Potato | cytosol, mitochondrion | 14.79 | 25.72 |
| PGSC0003DMT400079119 | Potato | nucleus | 70.21 | 25.21 |
| PGSC0003DMT400013995 | Potato | nucleus | 67.92 | 25.19 |
| KRG91641 | Soybean | nucleus | 71.04 | 25.17 |
| KRH35157 | Soybean | nucleus | 69.38 | 24.78 |
| HORVU1Hr1G094740.1 | Barley | nucleus | 66.04 | 24.59 |
| TraesCS1A01G438600.2 | Wheat | nucleus | 66.04 | 24.55 |
| KXG22680 | Sorghum | nucleus | 66.04 | 24.52 |
| TraesCS1D01G446400.1 | Wheat | golgi | 66.04 | 24.46 |
| Zm00001d009749_P001 | Maize | nucleus | 65.83 | 24.44 |
| TraesCS1B01G472500.1 | Wheat | nucleus | 65.83 | 24.31 |
| TraesCS1D01G446900.2 | Wheat | nucleus | 66.04 | 22.58 |
| GSMUA_Achr1P05220_001 | Banana | nucleus | 60.42 | 15.98 |
| AT4G11160.2 | Thale cress | plastid | 18.12 | 11.71 |
| AT1G17220.1 | Thale cress | plastid | 19.79 | 9.26 |
Protein Annotations
| MapMan:17.4.3.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.10050 | Gene3D:3.40.50.300 | EntrezGene:817316 | ProteinID:AEC08028.1 |
| ArrayExpress:AT2G27700 | EnsemblPlantsGene:AT2G27700 | RefSeq:AT2G27700 | TAIR:AT2G27700 | RefSeq:AT2G27700-TAIR-G | EnsemblPlants:AT2G27700.2 |
| TAIR:AT2G27700.2 | Unigene:At.52942 | InterPro:EFTu-like_2 | UniProt:F4IGQ9 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR000795 | InterPro:IPR036925 |
| RefSeq:NP_001118399.1 | InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF03144 | PFAM:PF11987 | PRINTS:PR00315 |
| PFscan:PS51722 | PANTHER:PTHR43381 | PANTHER:PTHR43381:SF4 | SUPFAM:SSF52156 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:TF_GTP-bd_dom | InterPro:TIF_IF2 | InterPro:TIF_IF2_dom3 | InterPro:TIF_IF2_dom3_sf | TIGRFAMs:TIGR00231 | UniParc:UPI000173918E |
| SEG:seg | : | : | : | : | : |
Description
Eukaryotic translation initiation factor 2 family protein / eIF-2 family protein [Source:UniProtKB/TrEMBL;Acc:F4IGQ9]
Coordinates
chr2:-:11813949..11816002
Molecular Weight (calculated)
53462.3 Da
IEP (calculated)
5.099
GRAVY (calculated)
-0.070
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLKKPSARG GDDKQQIVGD EHSRRNKLSE EDKVRSPICC MMGHIDTGKT KLLDYITGNV QEGEAGGTTQ KMGATYLSAR NILEKTMELK SDTKLKVPRP
101: LFIDTPGYEF YTNLRSRGLG LCDFAILVVD IMHGLEPQTI ECLNLLRMKN TEFIIALNKV DRLYGWRICE NAPILEAMKQ QTKDVINEFN MRLNEIINQF
201: KEQGLNSELY YKNKEMGETF SIVPTCAISG EGIPDLLLLL VQLTQKTMVE KLITYVDKVQ QCTVLEVKVM EGYGTTIDVV LVNGELHEGG QIVVCGLQGP
301: IVTTIRALLT PHPIKELHVN GNHVHHEVIK AAECINIIAK DLEHVIVGTA LHVVGPDDDI EAIKELVMED VNSVLSRIDK SGEGVYIQAS TLGSLEALLE
401: FLKSPAVKLP VGGIGIGPVQ KKDVMKAGVM LERKKEFATI LALDVEVTTE ARELADEMEV KIFCSDIMYH LFDQYQAYIC
101: LFIDTPGYEF YTNLRSRGLG LCDFAILVVD IMHGLEPQTI ECLNLLRMKN TEFIIALNKV DRLYGWRICE NAPILEAMKQ QTKDVINEFN MRLNEIINQF
201: KEQGLNSELY YKNKEMGETF SIVPTCAISG EGIPDLLLLL VQLTQKTMVE KLITYVDKVQ QCTVLEVKVM EGYGTTIDVV LVNGELHEGG QIVVCGLQGP
301: IVTTIRALLT PHPIKELHVN GNHVHHEVIK AAECINIIAK DLEHVIVGTA LHVVGPDDDI EAIKELVMED VNSVLSRIDK SGEGVYIQAS TLGSLEALLE
401: FLKSPAVKLP VGGIGIGPVQ KKDVMKAGVM LERKKEFATI LALDVEVTTE ARELADEMEV KIFCSDIMYH LFDQYQAYIC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.