Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400030470 | Potato | cytosol | 4.1 | 82.81 |
| PGSC0003DMT400029834 | Potato | cytosol | 4.02 | 81.25 |
| AT2G27700.2 | Thale cress | cytosol | 27.9 | 75.21 |
| CDY45947 | Canola | nucleus | 64.06 | 72.28 |
| Bra008279.1-P | Field mustard | nucleus | 70.56 | 72.0 |
| PGSC0003DMT400071616 | Potato | cytosol | 38.25 | 70.61 |
| CDY49760 | Canola | plastid | 23.72 | 70.41 |
| Solyc03g058380.2.1 | Tomato | nucleus | 41.34 | 70.3 |
| CDY20385 | Canola | nucleus | 64.14 | 68.2 |
| GSMUA_Achr5P09710_001 | Banana | cytosol | 46.91 | 67.67 |
| PGSC0003DMT400033284 | Potato | cytosol | 7.26 | 65.73 |
| AT1G76720.2 | Thale cress | cytosol | 56.34 | 59.56 |
| KRG91641 | Soybean | nucleus | 59.43 | 56.75 |
| Solyc06g054400.2.1 | Tomato | nucleus | 49.69 | 56.35 |
| Os05t0592600-01 | Rice | nucleus | 51.0 | 54.68 |
| VIT_18s0076g00310.t01 | Wine grape | nucleus | 56.18 | 53.77 |
| AT1G21160.1 | Thale cress | cytosol | 45.21 | 53.57 |
| TraesCS7B01G382100.1 | Wheat | cytosol | 21.33 | 53.18 |
| Solyc03g058350.2.1 | Tomato | nucleus | 46.37 | 51.9 |
| PGSC0003DMT400079119 | Potato | nucleus | 53.32 | 51.61 |
| HORVU1Hr1G094740.1 | Barley | nucleus | 51.31 | 51.51 |
| KRH35157 | Soybean | nucleus | 53.48 | 51.49 |
| TraesCS1D01G446400.1 | Wheat | golgi | 51.24 | 51.16 |
| KXG22680 | Sorghum | nucleus | 51.08 | 51.12 |
| TraesCS1A01G438600.2 | Wheat | nucleus | 50.77 | 50.89 |
| Zm00001d009749_P001 | Maize | nucleus | 50.77 | 50.81 |
| TraesCS1B01G472500.1 | Wheat | nucleus | 50.77 | 50.54 |
| KRG88874 | Soybean | cytosol | 14.84 | 49.61 |
| PGSC0003DMT400013995 | Potato | nucleus | 48.84 | 48.84 |
| PGSC0003DMT400011181 | Potato | cytosol, mitochondrion | 9.89 | 46.38 |
| TraesCS1D01G446900.2 | Wheat | nucleus | 49.77 | 45.87 |
| OQU79180 | Sorghum | nucleus | 29.37 | 44.24 |
| TraesCS7A01G479800.2 | Wheat | mitochondrion, plastid | 27.43 | 42.82 |
| GSMUA_Achr1P05220_001 | Banana | nucleus | 46.37 | 33.06 |
| AT4G11160.2 | Thale cress | plastid | 10.51 | 18.3 |
| AT1G17220.1 | Thale cress | plastid | 11.9 | 15.01 |
Protein Annotations
| MapMan:17.4.3.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.10050 | Gene3D:3.40.50.300 | EntrezGene:844015 | ProteinID:AEE35891.1 |
| ArrayExpress:AT1G76810 | EnsemblPlantsGene:AT1G76810 | RefSeq:AT1G76810 | TAIR:AT1G76810 | RefSeq:AT1G76810-TAIR-G | EnsemblPlants:AT1G76810.1 |
| TAIR:AT1G76810.1 | Unigene:At.34607 | ncoils:Coil | InterPro:EFTu-like_2 | UniProt:F4I420 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006412 |
| GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR000795 | InterPro:IPR036925 | RefSeq:NP_177807.3 |
| InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF03144 | PFAM:PF11987 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00315 | PFscan:PS51722 | PANTHER:PTHR43381 | PANTHER:PTHR43381:SF4 |
| SUPFAM:SSF50447 | SUPFAM:SSF52156 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:TF_GTP-bd_dom | InterPro:TIF_IF2 |
| InterPro:TIF_IF2_dom3 | InterPro:TIF_IF2_dom3_sf | TIGRFAMs:TIGR00231 | InterPro:Transl_B-barrel_sf | UniParc:UPI000034F54F | SEG:seg |
Description
Eukaryotic translation initiation factor 2 (eIF-2) family protein [Source:UniProtKB/TrEMBL;Acc:F4I420]
Coordinates
chr1:-:28830902..28836748
Molecular Weight (calculated)
142124.0 Da
IEP (calculated)
5.042
GRAVY (calculated)
-0.759
Length
1294 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGRKKPSARG GDAEQQPPAS SLVGATKSKK KGAQIDDDEY SIGTELSEES KVEEEKVVVI TGKKKGKKGN KKGTQQDDDD DFSDKVSAAG VKDDVPEIAF
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.