Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400030470 | Potato | cytosol | 7.88 | 93.75 |
| PGSC0003DMT400029834 | Potato | cytosol | 7.75 | 92.19 |
| PGSC0003DMT400033284 | Potato | cytosol | 14.19 | 75.52 |
| AT2G27700.2 | Thale cress | cytosol | 44.94 | 71.25 |
| CDY49760 | Canola | plastid | 38.5 | 67.2 |
| GSMUA_Achr5P09710_001 | Banana | cytosol | 67.28 | 57.08 |
| Solyc03g058350.2.1 | Tomato | nucleus | 85.94 | 56.57 |
| PGSC0003DMT400011181 | Potato | cytosol, mitochondrion | 19.19 | 52.9 |
| TraesCS7B01G382100.1 | Wheat | cytosol | 36.01 | 52.79 |
| KRG88874 | Soybean | cytosol | 25.76 | 50.65 |
| Solyc06g054400.2.1 | Tomato | nucleus | 74.64 | 49.78 |
| CDY33673 | Canola | cytosol | 62.42 | 47.12 |
| CDY45947 | Canola | nucleus | 70.04 | 46.47 |
| Bra016430.1-P | Field mustard | cytosol | 62.55 | 45.99 |
| CDX96600 | Canola | cytosol | 60.18 | 45.75 |
| CDY20385 | Canola | nucleus | 69.65 | 43.55 |
| OQU79180 | Sorghum | nucleus | 48.49 | 42.96 |
| VIT_18s0076g00310.t01 | Wine grape | nucleus | 75.82 | 42.68 |
| Os05t0592600-01 | Rice | nucleus | 66.75 | 42.09 |
| Bra008279.1-P | Field mustard | nucleus | 69.78 | 41.88 |
| KRG91641 | Soybean | nucleus | 73.98 | 41.55 |
| AT1G76810.1 | Thale cress | nucleus | 70.3 | 41.34 |
| AT1G21160.1 | Thale cress | cytosol | 58.74 | 40.93 |
| AT1G76720.2 | Thale cress | cytosol | 65.18 | 40.52 |
| HORVU1Hr1G094740.1 | Barley | nucleus | 67.54 | 39.88 |
| TraesCS7A01G479800.2 | Wheat | mitochondrion, plastid | 43.36 | 39.81 |
| TraesCS1A01G438600.2 | Wheat | nucleus | 67.41 | 39.74 |
| KRH35157 | Soybean | nucleus | 70.04 | 39.66 |
| KXG22680 | Sorghum | nucleus | 67.28 | 39.6 |
| TraesCS1D01G446400.1 | Wheat | golgi | 67.41 | 39.58 |
| TraesCS1B01G472500.1 | Wheat | nucleus | 67.41 | 39.46 |
| Zm00001d009749_P001 | Maize | nucleus | 66.62 | 39.21 |
| CDX81961 | Canola | cytosol | 14.19 | 36.61 |
| TraesCS1D01G446900.2 | Wheat | nucleus | 67.54 | 36.61 |
| CDX81960 | Canola | cytosol | 12.48 | 34.05 |
| CDY13882 | Canola | cytosol | 12.75 | 32.99 |
| Bra031112.1-P | Field mustard | cytosol | 12.75 | 32.99 |
| CDY13881 | Canola | cytosol | 15.9 | 26.65 |
| Bra031113.1-P | Field mustard | cytosol | 15.77 | 26.43 |
| GSMUA_Achr1P05220_001 | Banana | nucleus | 59.92 | 25.12 |
| Solyc08g081900.2.1 | Tomato | mitochondrion | 15.77 | 16.3 |
| Solyc07g056020.2.1 | Tomato | nucleus, plastid | 18.66 | 14.06 |
Protein Annotations
| MapMan:17.4.3.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.10050 | Gene3D:3.40.50.300 | ncoils:Coil | InterPro:EFTu-like_2 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | InterPro:IPR000795 | InterPro:IPR036925 | UniProt:K4BGP0 | InterPro:P-loop_NTPase | PFAM:PF00009 |
| PFAM:PF03144 | PFAM:PF11987 | PRINTS:PR00315 | PFscan:PS51722 | PANTHER:PTHR43381 | PANTHER:PTHR43381:SF4 |
| SUPFAM:SSF50447 | SUPFAM:SSF52156 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | EnsemblPlantsGene:Solyc03g058380.2 | EnsemblPlants:Solyc03g058380.2.1 |
| InterPro:TF_GTP-bd_dom | InterPro:TIF_IF2 | InterPro:TIF_IF2_dom3 | InterPro:TIF_IF2_dom3_sf | TIGRFAMs:TIGR00231 | InterPro:Transl_B-barrel_sf |
| UniParc:UPI0002768AF6 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:24057076..24065042
Molecular Weight (calculated)
84697.9 Da
IEP (calculated)
4.873
GRAVY (calculated)
-0.312
Length
761 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEESIEISE VKEHHQEIVS EVDCVETEKV EDVDSTITEE KSEIADAEEN EVEEEEEDDE EWDAKSWDDA DLKLPGKSAF EDEEVDSELQ PITKKEIKVV
101: SSAVHGAAIL PVASKSVIPI QKTAATVPGV LKNDRSRKGE PEARGAEQNK QKDSPEEPGA PNQDEDNLRS PICCIMGHVD TGKTKLLDCI RGTNVQEGEA
201: GGITQQIGAT YFPAENIRER TKELKADAKL KVPGLLVIDT PGHESFTNLR SRGSGLCDIA ILVVDIMHGL EPQTIESLNL LKMRNTEFIV ALNKVDRLYG
301: WKVCKNAPIV KAMKQQSKDV QFEFNTRLTQ IVTQFKEQGI NTELYYKNKE MGKDTFSIVP TSAISGEGIP DMLLLLVQWT QKTMIERLTY SNEVQCTVLE
401: VKVVEGHGTT IDVVLVNGVL HEGDQIVVCG MQGPIVTSIR ALLTPHPMKE LRVKGTYLHH KKIKAAQGIK ITAQGFEHAI AGTSLYVVGP DDDVEDIKEA
501: AMEDMKSVMS RIDKSGEGVY VQASTLGSLE ALLEFLKTPE VSIPVSGIGI GPVHKKDVMK ASVMLEKKKE YATILAFDVK VTQEARELSD ELGVKVFMAD
601: IIYHLFDQFK AYIDTIKEEK KKEVAEEAVF PCVLKIVPNC VFNKKDPIVL GVDVLEGIVR IGSPICIPQK EFIDIGRIAS IENNHKPVDS AKKGQRVAIK
701: IVGSNPEEQQ KMFGRHFEME DELVSKISRR SIDILKANFR KDLSVEDWRL VMKLKTLFKI Q
101: SSAVHGAAIL PVASKSVIPI QKTAATVPGV LKNDRSRKGE PEARGAEQNK QKDSPEEPGA PNQDEDNLRS PICCIMGHVD TGKTKLLDCI RGTNVQEGEA
201: GGITQQIGAT YFPAENIRER TKELKADAKL KVPGLLVIDT PGHESFTNLR SRGSGLCDIA ILVVDIMHGL EPQTIESLNL LKMRNTEFIV ALNKVDRLYG
301: WKVCKNAPIV KAMKQQSKDV QFEFNTRLTQ IVTQFKEQGI NTELYYKNKE MGKDTFSIVP TSAISGEGIP DMLLLLVQWT QKTMIERLTY SNEVQCTVLE
401: VKVVEGHGTT IDVVLVNGVL HEGDQIVVCG MQGPIVTSIR ALLTPHPMKE LRVKGTYLHH KKIKAAQGIK ITAQGFEHAI AGTSLYVVGP DDDVEDIKEA
501: AMEDMKSVMS RIDKSGEGVY VQASTLGSLE ALLEFLKTPE VSIPVSGIGI GPVHKKDVMK ASVMLEKKKE YATILAFDVK VTQEARELSD ELGVKVFMAD
601: IIYHLFDQFK AYIDTIKEEK KKEVAEEAVF PCVLKIVPNC VFNKKDPIVL GVDVLEGIVR IGSPICIPQK EFIDIGRIAS IENNHKPVDS AKKGQRVAIK
701: IVGSNPEEQQ KMFGRHFEME DELVSKISRR SIDILKANFR KDLSVEDWRL VMKLKTLFKI Q
0001: MGRKKPSARG GDAEQQPPAS SLVGATKSKK KGAQIDDDEY SIGTELSEES KVEEEKVVVI TGKKKGKKGN KKGTQQDDDD DFSDKVSAAG VKDDVPEIAF
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ
Arabidopsis Description
Eukaryotic translation initiation factor 2 (eIF-2) family protein [Source:UniProtKB/TrEMBL;Acc:F4I420]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.