Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400030470 | Potato | cytosol | 4.11 | 85.94 |
| PGSC0003DMT400029834 | Potato | cytosol | 4.04 | 84.38 |
| PGSC0003DMT400071616 | Potato | cytosol | 39.57 | 75.46 |
| AT2G27700.2 | Thale cress | cytosol | 25.21 | 70.21 |
| Solyc06g054400.2.1 | Tomato | nucleus | 59.31 | 69.5 |
| PGSC0003DMT400033284 | Potato | cytosol | 7.4 | 69.23 |
| GSMUA_Achr5P09710_001 | Banana | cytosol | 44.2 | 65.89 |
| CDY49760 | Canola | plastid | 21.24 | 65.14 |
| CDY45947 | Canola | nucleus | 48.09 | 56.06 |
| PGSC0003DMT400013995 | Potato | nucleus | 53.1 | 54.87 |
| VIT_18s0076g00310.t01 | Wine grape | nucleus | 54.9 | 54.29 |
| Bra008279.1-P | Field mustard | nucleus | 51.31 | 54.1 |
| KRG91641 | Soybean | nucleus | 54.38 | 53.65 |
| TraesCS7B01G382100.1 | Wheat | cytosol | 20.79 | 53.56 |
| CDY20385 | Canola | nucleus | 48.54 | 53.33 |
| AT1G76810.1 | Thale cress | nucleus | 51.61 | 53.32 |
| CDY33673 | Canola | cytosol | 39.64 | 52.58 |
| CDX96600 | Canola | cytosol | 39.04 | 52.15 |
| Os05t0592600-01 | Rice | nucleus | 46.82 | 51.86 |
| Bra016430.1-P | Field mustard | cytosol | 39.94 | 51.59 |
| KXG22680 | Sorghum | nucleus | 48.62 | 50.27 |
| Zm00001d009749_P001 | Maize | nucleus | 48.17 | 49.81 |
| TraesCS1A01G438600.2 | Wheat | nucleus | 47.72 | 49.42 |
| HORVU1Hr1G094740.1 | Barley | nucleus | 47.57 | 49.34 |
| TraesCS1B01G472500.1 | Wheat | nucleus | 47.42 | 48.77 |
| AT1G76720.2 | Thale cress | cytosol | 44.58 | 48.69 |
| KRH35157 | Soybean | nucleus | 48.77 | 48.51 |
| TraesCS1D01G446400.1 | Wheat | golgi | 46.9 | 48.38 |
| KRG88874 | Soybean | cytosol | 13.99 | 48.32 |
| AT1G21160.1 | Thale cress | cytosol | 39.27 | 48.08 |
| PGSC0003DMT400011181 | Potato | cytosol, mitochondrion | 9.87 | 47.83 |
| TraesCS1D01G446900.2 | Wheat | nucleus | 46.9 | 44.66 |
| OQU79180 | Sorghum | nucleus | 28.27 | 44.0 |
| TraesCS7A01G479800.2 | Wheat | mitochondrion, plastid | 27.08 | 43.67 |
| CDX81960 | Canola | cytosol | 7.48 | 35.84 |
| CDX81961 | Canola | cytosol | 7.78 | 35.25 |
| CDY13882 | Canola | cytosol | 7.55 | 34.35 |
| Bra031112.1-P | Field mustard | cytosol | 7.55 | 34.35 |
| GSMUA_Achr1P05220_001 | Banana | nucleus | 41.81 | 30.8 |
| CDY13881 | Canola | cytosol | 9.12 | 26.87 |
| Bra031113.1-P | Field mustard | cytosol | 8.98 | 26.43 |
| PGSC0003DMT400031711 | Potato | mitochondrion | 9.95 | 18.07 |
| PGSC0003DMT400079833 | Potato | plastid | 12.27 | 16.29 |
Protein Annotations
| EntrezGene:102604773 | MapMan:17.4.3.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.10050 | Gene3D:3.40.50.300 | ncoils:Coil |
| InterPro:EFTu-like_2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | InterPro:IPR000795 | InterPro:IPR036925 | UniProt:M1D1A0 | InterPro:P-loop_NTPase |
| PFAM:PF00009 | PFAM:PF03144 | PFAM:PF11987 | EnsemblPlantsGene:PGSC0003DMG400030793 | PGSC:PGSC0003DMG400030793 | EnsemblPlants:PGSC0003DMT400079119 |
| PRINTS:PR00315 | PFscan:PS51722 | PANTHER:PTHR43381 | PANTHER:PTHR43381:SF4 | SUPFAM:SSF50447 | SUPFAM:SSF52156 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:TF_GTP-bd_dom | InterPro:TIF_IF2 | InterPro:TIF_IF2_dom3 | InterPro:TIF_IF2_dom3_sf |
| TIGRFAMs:TIGR00231 | InterPro:Transl_B-barrel_sf | UniParc:UPI000294A7EB | RefSeq:XP_006356684.1 | SEG:seg | : |
Description
Translation initiation factor IF-2 [Source:PGSC_GENE;Acc:PGSC0003DMG400030793]
Coordinates
chr6:+:40730997..40739033
Molecular Weight (calculated)
147883.0 Da
IEP (calculated)
5.358
GRAVY (calculated)
-0.733
Length
1337 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGRKKPVREN ESLESSKQGG GGGGKSKKKN RVIDDDDYSV GTELSEDTVV LEDKAELVPE ISKKRGKKGK KSGARDEDVE ETEDKLVRKE EDDEKKKLGG
0101: GEKNLAKQVG GGGKSKKKNV AIDDDEYSIG TEISAETQEE ELAPAVAFGK KKSKKGKKGG VSTSDYGSLG QDDDDEDVSG LSRDRDGVVG DSDREAESVA
0201: SVTGKTKNLR LGKSSASLSV TSAFHAIDDQ DNETGQLSEE DEESTVAFTG RSSGISFSAA LLDEENDADT SLKLETEANE EDDAPGIIFS GKKKSSKKKN
0301: KSASSTIDTA FRNDSTNVVD QDHCNLGVNR EDADDNRGKK QTTDVLETSK NKTKKKKSGH ASKILADLGE GSTITTPAQP ANASLPQEEK SQQQSQLGDD
0401: TGEREAVEEA VKSAAAKKKK KKEKEKEKKA AVAVSEMEEK QEGTKNDTRA KLADKKQSKQ VREMQERLKK MKEVEESKKK EEEERLRKEE EEHLRLEELE
0501: RLAEEKKHLK KEREKEKLLK KKLEGKLLTG KQKEEARRLE AMRKQFLASG GALPLSTGES RKDATKRPIY QSKKSKSQAW ANGKVQEESV ESTEVQENQQ
0601: EIVSEVDSMK TEKAEDIDLV SVEEKSEVAD AEENRVEEEE DEEEWDARSW DDADLKLPRK SAFEDEELDS DPQPIITKAA RSVVSDTGPL PVAAKSVIPT
0701: QKAVASVPDV TKNDGSKKRE PVVVVSGKGT EKPGASSSKS EDNLRSPICC IMGHVDTGKT KLLDCIRGTN VQEGEAGGIT QQIGATYFPA ENIRERTKEL
0801: KADAKLKVPG LLVIDTPGHE SFTNLRSRGS SLCDIAILVV DIMHGLEPQT IESLNLLKMR NTEFIVALNK IDRLYGWKVC RNAPIVKAMK QQSKDVQFEF
0901: ITRLTQIVTQ FKEQGINTEL YYRNKEMGKD TFSIIPTSAI SGEGIPDLLL LLVQWTQKTM VERLTYSSEV QCTVLEVKAI EGHGTTIDVV LINGMLHEGD
1001: QIIVCGMQDP IVTSIRALLT PHPMKELRIK GSYVHHKEIK AAQGIKINAQ GLEHAIAGTS LYVVGPDDDV ENIKEAAMED MRSVMSRIDR SGEGVYVQAS
1101: TLGSLEALLE FLKTDEVRIP VSGIGIGPVH KKDVMKASVM LEKKIEYATI LAFDVKVTQE ARELADEAGV KIFIADIIYH LFDQFKAYID NLKEEKKKEV
1201: AEEAVFPCSL KIVPNHVYNK KDPIVVGVDV LEGIARVGTP ICIPQREFID IGRIASIENN HRPVDSAKKG QRVSIKIVGS NSEEKQKMFG RHFEIEDELV
1301: SKVSRRSIDI LKANFRNDLS IEDWKLVKTL RDLFKIQ
0101: GEKNLAKQVG GGGKSKKKNV AIDDDEYSIG TEISAETQEE ELAPAVAFGK KKSKKGKKGG VSTSDYGSLG QDDDDEDVSG LSRDRDGVVG DSDREAESVA
0201: SVTGKTKNLR LGKSSASLSV TSAFHAIDDQ DNETGQLSEE DEESTVAFTG RSSGISFSAA LLDEENDADT SLKLETEANE EDDAPGIIFS GKKKSSKKKN
0301: KSASSTIDTA FRNDSTNVVD QDHCNLGVNR EDADDNRGKK QTTDVLETSK NKTKKKKSGH ASKILADLGE GSTITTPAQP ANASLPQEEK SQQQSQLGDD
0401: TGEREAVEEA VKSAAAKKKK KKEKEKEKKA AVAVSEMEEK QEGTKNDTRA KLADKKQSKQ VREMQERLKK MKEVEESKKK EEEERLRKEE EEHLRLEELE
0501: RLAEEKKHLK KEREKEKLLK KKLEGKLLTG KQKEEARRLE AMRKQFLASG GALPLSTGES RKDATKRPIY QSKKSKSQAW ANGKVQEESV ESTEVQENQQ
0601: EIVSEVDSMK TEKAEDIDLV SVEEKSEVAD AEENRVEEEE DEEEWDARSW DDADLKLPRK SAFEDEELDS DPQPIITKAA RSVVSDTGPL PVAAKSVIPT
0701: QKAVASVPDV TKNDGSKKRE PVVVVSGKGT EKPGASSSKS EDNLRSPICC IMGHVDTGKT KLLDCIRGTN VQEGEAGGIT QQIGATYFPA ENIRERTKEL
0801: KADAKLKVPG LLVIDTPGHE SFTNLRSRGS SLCDIAILVV DIMHGLEPQT IESLNLLKMR NTEFIVALNK IDRLYGWKVC RNAPIVKAMK QQSKDVQFEF
0901: ITRLTQIVTQ FKEQGINTEL YYRNKEMGKD TFSIIPTSAI SGEGIPDLLL LLVQWTQKTM VERLTYSSEV QCTVLEVKAI EGHGTTIDVV LINGMLHEGD
1001: QIIVCGMQDP IVTSIRALLT PHPMKELRIK GSYVHHKEIK AAQGIKINAQ GLEHAIAGTS LYVVGPDDDV ENIKEAAMED MRSVMSRIDR SGEGVYVQAS
1101: TLGSLEALLE FLKTDEVRIP VSGIGIGPVH KKDVMKASVM LEKKIEYATI LAFDVKVTQE ARELADEAGV KIFIADIIYH LFDQFKAYID NLKEEKKKEV
1201: AEEAVFPCSL KIVPNHVYNK KDPIVVGVDV LEGIARVGTP ICIPQREFID IGRIASIENN HRPVDSAKKG QRVSIKIVGS NSEEKQKMFG RHFEIEDELV
1301: SKVSRRSIDI LKANFRNDLS IEDWKLVKTL RDLFKIQ
0001: MGRKKPSARG GDAEQQPPAS SLVGATKSKK KGAQIDDDEY SIGTELSEES KVEEEKVVVI TGKKKGKKGN KKGTQQDDDD DFSDKVSAAG VKDDVPEIAF
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ
0101: VGKKKSKGKK GGGSVSFALL DDEDEKEDNE SDGDKDDEPV ISFTGKKHAS KKGKKGGNSF AASAFDALGS DDDDTEEVHE DEEEESPITF SGKKKKSSKS
0201: SKKNTNSFTA DLLDEEEGTD ASNSRDDENT IEDEESPEVT FSGKKKSSKK KGGSVLASVG DDSVADETKT SDTKNVEVVE TGKSKKKKKN NKSGRTVQEE
0301: EDLDKLLAAL GETPAAERPA SSTPVEEKAA QPEPVAPVEN AGEKEGEEET AAAKKKKKKK EKEKEKKAAA AAAATSSVEV KEEKQEESVT EPLQPKKKDA
0401: KGKAAEKKIP KHVREMQEAL ARRQEAEERK KKEEEEKLRK EEEERRRQEE LEAQAEEAKR KRKEKEKEKL LRKKLEGKLL TAKQKTEAQK REAFKNQLLA
0501: AGGGLPVADN DGDATSSKRP IYANKKKSSR QKGIDTSVQG EDEVEPKENQ ADEQDTLGEV GLTDTGKVDL IELVNTDENS GPADVAQENG VEEDDEEDEW
0601: DAKSWGTVDL NLKGDFDDEE EEAQPVVKKE LKDAISKAHD SEPEAEKPTA KPAGTGKPLI AAVKATPEVE DATRTKRATR AKDASKKGKG LAPSESIEGE
0701: ENLRSPICCI MGHVDTGKTK LLDCIRGTNV QEGEAGGITQ QIGATYFPAE NIRERTKELK ADAKLKVPGL LVIDTPGHES FTNLRSRGSS LCDLAILVVD
0801: IMHGLEPQTI ESLNLLRMRN TEFIVALNKV DRLYGWKTCK NAPIVKAMKQ QNKDVINEFN LRLKNIINEF QEQGLNTELY YKNKDMGDTF SIVPTSAISG
0901: EGVPDLLLWL VQWAQKTMVE KLTYVDEVQC TVLEVKVIEG HGTTIDVVLV NGELHEGDQI VVCGLQGPIV TTIRALLTPH PMKELRVKGT YLHYKEIKAA
1001: QGIKITAQGL EHAIAGTALH VVGPDDDIEA IKESAMEDME SVLSRIDKSG EGVYVQASTL GSLEALLEYL KSPAVKIPVS GIGIGPVHKK DVMKAGVMLE
1101: RKKEYATILA FDVKVTTEAR ELADEMGVKI FCADIIYHLF DLFKAYIENI KEEKKKESAD EAVFPCVLQI LPNCVFNKKD PIVLGVDVIE GILKIGTPIC
1201: VPGREFIDIG RIASIENNHK PVDYAKKGNK VAIKIVGSNA EEQKMFGRHF DMEDELVSHI SRRSIDILKS NYRDELSLEE WKLVVKLKNI FKIQ
Arabidopsis Description
Eukaryotic translation initiation factor 2 (eIF-2) family protein [Source:UniProtKB/TrEMBL;Acc:F4I420]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.