Factsheet for TraesCS1A01G331200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G345100.2	Wheat	mitochondrion	98.17	98.17
TraesCS1D01G333900.1	Wheat	mitochondrion	97.33	97.33
HORVU1Hr1G077340.1	Barley	mitochondrion	97.33	97.33
Os09t0515500-01	Rice	mitochondrion	87.5	87.01
KXG26389	Sorghum	mitochondrion	83.99	83.99
Zm00001d003556_P003	Maize	mitochondrion	82.58	80.0
GSMUA_Achr11P...	Banana	cytosol	61.94	75.38
KRH48578	Soybean	cytosol, extracellular	11.8	73.68
VIT_14s0060g02210.t01	Wine grape	cytosol, plastid	68.68	67.45
KRH68380	Soybean	mitochondrion	63.76	63.23
KRG96646	Soybean	mitochondrion	63.34	62.81
PGSC0003DMT400031711	Potato	mitochondrion	64.89	62.77
Solyc08g081900.2.1	Tomato	mitochondrion	64.89	62.77
Bra033153.1-P	Field mustard	cytosol	58.01	59.68
AT4G11160.2	Thale cress	plastid	58.99	56.53
CDY25276	Canola	mitochondrion	58.29	56.39
CDX94227	Canola	mitochondrion, plastid	43.68	55.83
CDY05134	Canola	mitochondrion	56.32	54.71
CDX90791	Canola	mitochondrion	55.2	53.62
Bra000738.1-P	Field mustard	cytosol	55.76	38.73
TraesCS7A01G287900.1	Wheat	plastid	20.93	21.98
TraesCS7A01G479800.2	Wheat	mitochondrion, plastid	17.7	15.2
TraesCS1A01G438600.2	Wheat	nucleus	19.24	10.61

Protein Annotations

MapMan:17.7.3.3	Gene3D:2.40.30.10	Gene3D:3.40.50.10050	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006412	GO:GO:0006413
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:IPR000795	InterPro:IPR036925	HAMAP:MF_00100_B	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF11987	PFscan:PS51722	PANTHER:PTHR43381	PANTHER:PTHR43381:SF1	SUPFAM:SSF50447	SUPFAM:SSF52156
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	InterPro:TF_IF2_bacterial-like	InterPro:TIF_IF2	InterPro:TIF_IF2_dom3
InterPro:TIF_IF2_dom3_sf	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00487	EnsemblPlantsGene:TraesCS1A01G331200	EnsemblPlants:TraesCS1A01G331200.1	InterPro:Transl_B-barrel_sf
TIGR:cd01887	TIGR:cd03692	TIGR:cd03702	SEG:seg	:	:

Description

No Description!

Coordinates

chr1A:-:520338377..520344399

Molecular Weight (calculated)

77179.4 Da

IEP (calculated)

7.081

GRAVY (calculated)

-0.169

Length

712 amino acids

Sequence
(BLAST)

001: MMAWRMLRRK DVHTGLLNLA FRSDHGRTKH FASGTLGKLS QFVHGNGLQG AANCTVFKQS TIRNFHAGVY MLAWHQKKED VVGLKAPKRE KRVRKETRSQ
101: PPVEAPYIAP KPKLTKSAPD KIVEIFDGMT LRDLSKRSGA KINALQSILA DLGERVESEF DSITIDLAEL VGMELGVNIR RMHTGEGTVE PRPAVVTVMG
201: HVDHGKTSLL DSLRQTSVAA KEAGGITQHI GAFVVEMQSG ASITFLDTPG HAAFSAMRAR GAAVTDIVVL VVAADDGVMP QTLEAMSHAK VANVPIVVAI
301: NKCDKSGADP ERVRIQLGSE GLLLEDMGGD VQVVEISALS KLGLDKLEEA LLLQAEIMDL KARTDGPAQA FVVEARVDRG RGPLATTIVK SGTLVSGQYI
401: VVGAEWGRIR SLRDTVGKVT ESAKPAMPVE IEGLRGLPMA GDDVVVVDSE ERARMLSQGR KKKQEKDRLR KIDENMTEEA EIGEETPERV EMPIIVKADV
501: QGSVQAVTDA LRSLNSPQVF VNVVHVGVGP VSEHDIDLAQ ACRACIVGFN VRDPPSAITL GATQANIKIL LHKVIYHLLE EMGRLIVEKA PGTAETQISG
601: EAEVLNIFEL KGRSKSKGPD IKIAGCRITD GRFSRTGTMR LLRSGDVVFE GPCSSLKREK QDADTLDKGT DCGLVIEDCD EYQVGDTIQC LEQVIRKPKF
701: VSTQSGAVRI EC

Best Arabidopsis Sequence Match ( AT4G11160.2 )
(BLAST)

001: MPSFLSSLFG LGIQASFRIG LVLPRVVAST ERQISSTVLK RASESVSFSF APYINGFGFS SLSNWSRSYE SFPTETSIRY FHASRETLAK RKEDADRLLS
101: HRERKKQTVK TKGKFSKREK KTDKPPVEAP YVPPRLKRLA KGLPGKTVDI FEGMTLLELS KRTGESVAVL QSILINVGET FSSEFDTISV DVAELLAMEI
201: GINVRRQHST EGSEILPRPP VVTVMGHVDH GKTSLLDALR NTSVAAREAG GITQHVGAFV VGMPDSGTSI TFLDTPGHAA FSEMRARGAA VTDIVVLVVA
301: ADDGVMPQTL EAIAHARSAN VPVVVAINKC DKPGANPEKV KYQLTSEGIE LEDIGGNVQA VEVSAAKSTG LDKLEEALLL QAVDMDLKAR VDGPAQAYVV
401: EARLDKGRGP LATIIVKAGT LVRGQHVVIG CQWGRLRAIR DMIGKTTDRA TPAMPVEIEG LKGLPMAGDD VIVVESEERA RMLSEGRKRK YEKDRLLKAE
501: EARLEEAAAR LETESEEGFV RVELPIVVKS DVQGTAQAVA DALRTLNSPQ VSVNIVHSGV GAISHSDLDL AQACGACIVG FNVKGGSTGN LSAAQGSVKV
601: FHHRVIYHLL EDIGNLIVEK APGVSEMEVS GEAEVLSIFK ILGKRRTEED GVNIAGCKVM DGRVCRSGLM RLLRSGEVVF EGSCASLKRE KQDVEQVGKG
701: NECGLVFGDW NDFRVGDVIQ CMEPVIRKPK FISSESGAVR IEC

Arabidopsis Description

At4g11160 [Source:UniProtKB/TrEMBL;Acc:Q67ZW2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.