CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68380	Soybean	mitochondrion	91.36	91.36
KRH48578	Soybean	cytosol, extracellular	14.48	91.23
GSMUA_Achr11P...	Banana	cytosol	60.03	73.68
VIT_14s0060g02210.t01	Wine grape	cytosol, plastid	72.01	71.31
KXG26389	Sorghum	mitochondrion	65.18	65.73
Solyc08g081900.2.1	Tomato	mitochondrion	66.99	65.35
PGSC0003DMT400031711	Potato	mitochondrion	66.99	65.35
Os09t0515500-01	Rice	mitochondrion	64.76	64.94
TraesCS1D01G333900.1	Wheat	mitochondrion	62.95	63.48
TraesCS1A01G331200.1	Wheat	mitochondrion	62.81	63.34
Bra033153.1-P	Field mustard	cytosol	61.0	63.29
HORVU1Hr1G077340.1	Barley	mitochondrion	62.67	63.2
TraesCS1B01G345100.2	Wheat	mitochondrion	62.4	62.92
Zm00001d003556_P003	Maize	mitochondrion	64.21	62.72
AT4G11160.2	Thale cress	plastid	61.56	59.49
CDY25276	Canola	mitochondrion	60.45	58.97
CDX94227	Canola	mitochondrion, plastid	44.43	57.27
CDY05134	Canola	mitochondrion	58.36	57.16
CDX90791	Canola	mitochondrion	57.24	56.07
Bra000738.1-P	Field mustard	cytosol	56.82	39.8
KRH43837	Soybean	nucleus, plastid	31.34	22.28
KRH13635	Soybean	nucleus	31.48	22.27
KRG88874	Soybean	cytosol	10.31	19.12
KRG91641	Soybean	nucleus	17.55	9.3
KRH35157	Soybean	nucleus	16.71	8.93

Protein Annotations

EntrezGene:100790572	MapMan:17.7.3.3	Gene3D:2.40.30.10	Gene3D:3.40.50.10050	Gene3D:3.40.50.300	EMBL:ACUP02012162
EnsemblPlantsGene:GLYMA_19G224000	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	UniProt:I1NBL5	InterPro:IPR000795
InterPro:IPR036925	ProteinID:KRG96645.1	EnsemblPlants:KRG96646	ProteinID:KRG96646	ProteinID:KRG96646.1	ProteinID:KRG96647.1
HAMAP:MF_00100_B	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF11987	PFscan:PS51722	PANTHER:PTHR43381
PANTHER:PTHR43381:SF1	SUPFAM:SSF50447	SUPFAM:SSF52156	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom
InterPro:TF_IF2_bacterial-like	InterPro:TIF_IF2	InterPro:TIF_IF2_dom3	InterPro:TIF_IF2_dom3_sf	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00487
InterPro:Transl_B-barrel_sf	UniParc:UPI000233E5F9	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:47619962..47625447

Molecular Weight (calculated)

77174.4 Da

IEP (calculated)

8.059

GRAVY (calculated)

-0.046

Length

718 amino acids

Sequence
(BLAST)

001: MAWRELGKKR IYMNFTRALT TTPFRYAAGS NFASIFTVQS VCASARCVPD FTNQSSQGVA GCGRETKECE IRCFHASSQV WARSDGPLGL QTPKRVYVKR
101: GGRNQLPVGA PYACRNVPAT KSNPDKTIEI FEGMTLVELA KRTGRSVSSL QDILTNVGEK FQSEFELLSM DIAELVTMEA GINVKRLHSA EGAEILPRPA
201: VVTVMGHVDH GKTSLLDALR QTSVAAKEAG GITQHIGAFV VAMPSGASIT FLDTPGHAAF SAMRARGAAV TDIVVLVVAA DDGVMPQTLE AMSHAKAANV
301: PIVVAINKCD KAGANSEKVK LQLASEGLLL EEMGGDVQVV EVSATEKIGL DNLEEALLLQ ADMMDLKART DGPAQAYVVE ARLDKGRGPL VTTIVKAGTL
401: VCGQHVVVGS QWGRIRAIKD MTGKLTQRAT PAMPVEIEGL RGLPMAGDDV IVVHSEERAR MLSSGRQRKY EENRLRNKMI QDKPTTSDDS KEVPRWVEMP
501: VIVKADVQGT VQAVTDALKT LNSAQVFVNV VHVGAGPISQ SDVDLAQACG ACIVGFNVKS PPTALSQAAA RAGIKIILHR VIYHLLEDIG NLIIERAPGT
601: SETHVAGQAE VLNIFEIKGS KSKGPDVKIA GCRVIDGSVT RSATLRLLRS GEVVFEGLCT SLKREKQDVD TVKKGTECGV VISNWYDFQI GDVIQCLEQV
701: IRKPQFIKSE SGAVRIEC

Best Arabidopsis Sequence Match ( AT4G11160.1 )
(BLAST)

001: MTSRHLGKKG IQASFRIGLV LPRVVASTER QISSTVLKRA SESVSFSFAP YINGFGFSSL SNWSRSYESF PTETSIRYFH ASRETLAKRK EDADRLLSHR
101: ERKKQTVKTK GKFSKREKKT DKPPVEAPYV PPRLKRLAKG LPGKTVDIFE GMTLLELSKR TGESVAVLQS ILINVGETFS SEFDTISVDV AELLAMEIGI
201: NVRRQHSTEG SEILPRPPVV TVMGHVDHGK TSLLDALRNT SVAAREAGGI TQHVGAFVVG MPDSGTSITF LDTPGHAAFS EMRARGAAVT DIVVLVVAAD
301: DGVMPQTLEA IAHARSANVP VVVAINKCDK PGANPEKVKY QLTSEGIELE DIGGNVQAVE VSAAKSTGLD KLEEALLLQA VDMDLKARVD GPAQAYVVEA
401: RLDKGRGPLA TIIVKAGTLV RGQHVVIGCQ WGRLRAIRDM IGKTTDRATP AMPVEIEGLK GLPMAGDDVI VVESEERARM LSEGRKRKYE KDRLLKAEEA
501: RLEEAAARLE TESEEGFVRV ELPIVVKSDV QGTAQAVADA LRTLNSPQVS VNIVHSGVGA ISHSDLDLAQ ACGACIVGFN VKGGSTGNLS AAQGSVKVFH
601: HRVIYHLLED IGNLIVEKAP GVSEMEVSGE AEVLSIFKIL GKRRTEEDGV NIAGCKVMDG RVCRSGLMRL LRSGEVVFEG SCASLKREKQ DVEQVGKGNE
701: CGLVFGDWND FRVGDVIQCM EPVIRKPKFI SSESGAVRIE C

Arabidopsis Description

At4g11160 [Source:UniProtKB/TrEMBL;Acc:Q67ZW2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.