Factsheet for TraesCS1D01G333900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G345100.2	Wheat	mitochondrion	98.31	98.31
TraesCS1A01G331200.1	Wheat	mitochondrion	97.33	97.33
HORVU1Hr1G077340.1	Barley	mitochondrion	96.35	96.35
Os09t0515500-01	Rice	mitochondrion	88.2	87.71
KXG26389	Sorghum	mitochondrion	84.69	84.69
Zm00001d003556_P003	Maize	mitochondrion	83.01	80.41
GSMUA_Achr11P...	Banana	cytosol	62.08	75.56
KRH48578	Soybean	cytosol, extracellular	11.8	73.68
VIT_14s0060g02210.t01	Wine grape	cytosol, plastid	68.54	67.31
KRH68380	Soybean	mitochondrion	63.48	62.95
KRG96646	Soybean	mitochondrion	63.48	62.95
PGSC0003DMT400031711	Potato	mitochondrion	64.89	62.77
Solyc08g081900.2.1	Tomato	mitochondrion	64.89	62.77
Bra033153.1-P	Field mustard	cytosol	58.15	59.83
CDX94227	Canola	mitochondrion, plastid	44.24	56.55
AT4G11160.2	Thale cress	plastid	58.57	56.12
CDY25276	Canola	mitochondrion	57.58	55.71
CDY05134	Canola	mitochondrion	56.74	55.12
CDX90791	Canola	mitochondrion	55.48	53.89
Bra000738.1-P	Field mustard	cytosol	55.06	38.24
TraesCS7D01G288700.1	Wheat	plastid	31.74	23.47
TraesCS1D01G446400.1	Wheat	golgi	18.68	10.26
TraesCS1D01G446900.2	Wheat	nucleus	18.4	9.33

Protein Annotations

MapMan:17.7.3.3	Gene3D:2.40.30.10	Gene3D:3.40.50.10050	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006412	GO:GO:0006413
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:IPR000795	InterPro:IPR036925	HAMAP:MF_00100_B	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF11987	PFscan:PS51722	PANTHER:PTHR43381	PANTHER:PTHR43381:SF1	SUPFAM:SSF50447	SUPFAM:SSF52156
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	InterPro:TF_IF2_bacterial-like	InterPro:TIF_IF2	InterPro:TIF_IF2_dom3
InterPro:TIF_IF2_dom3_sf	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00487	EnsemblPlantsGene:TraesCS1D01G333900	EnsemblPlants:TraesCS1D01G333900.1	InterPro:Transl_B-barrel_sf
TIGR:cd01887	TIGR:cd03692	TIGR:cd03702	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:-:423857006..423863538

Molecular Weight (calculated)

77161.4 Da

IEP (calculated)

6.832

GRAVY (calculated)

-0.162

Length

712 amino acids

Sequence
(BLAST)

001: MMAWRMLRRK DVHTGLVNLA FRLDHGGTKH FATGTLGRLP QFVHGNGLQG AANCTVFKQS TIRNFHAGVY MLAWHQKKED VVGLKAPKRE KRVRKETRSQ
101: PPVEAPYVAP KPKLTRSAPD KIVEIFDGMT LRDLSKRSGA TINALQSILA DLGERVESEF DSITIDLAEL VGMELGVNIR RMHTGEGTVE PRPAVVTVMG
201: HVDHGKTSLL DSLRQTSVAA KEAGGITQHI GAFVVEMQSG ASLTFLDTPG HAAFSAMRAR GAAVTDIVVL VVAADDGVMP QTLEAMSHAK VANVPIVVAI
301: NKCDKSGADP ERVRIQLGSE GLLLEDMGGD VQVVEISALS KLGLDKLEEA LLLQAEIMDL KARTDGPAQA FVVEARVDRG RGPLATTIVK SGTLVSGQYI
401: VVGSEWGRIR SLRDTAGKVT ESAKPAMPVE IEGLRGLPMA GDDVVVVDSE ERARMLSQGR KKKQEKDRLR KIDENMTEEA EIGEETPERV EMPIIVKADV
501: QGSVQAVTDA LRSLNSPQVF VNVVHVGVGP ISEHDIDLAQ ACRACIVGFN IRDPPSAITL GATQANIKIL LHKVIYHLLE EMGRLIVEKA PGTAETQISG
601: EAEVLNIFEL KGRSKSKGPD IKIAGCRITD GRFSRTGTMR LLRSGDVVFE GPCSSLKREK QDADTLDKGT DCGLVIEDCD EYQVGDTIQC LEQVIRKPKF
701: ISTQSGAVRI EC

Best Arabidopsis Sequence Match ( AT4G11160.1 )
(BLAST)

001: MTSRHLGKKG IQASFRIGLV LPRVVASTER QISSTVLKRA SESVSFSFAP YINGFGFSSL SNWSRSYESF PTETSIRYFH ASRETLAKRK EDADRLLSHR
101: ERKKQTVKTK GKFSKREKKT DKPPVEAPYV PPRLKRLAKG LPGKTVDIFE GMTLLELSKR TGESVAVLQS ILINVGETFS SEFDTISVDV AELLAMEIGI
201: NVRRQHSTEG SEILPRPPVV TVMGHVDHGK TSLLDALRNT SVAAREAGGI TQHVGAFVVG MPDSGTSITF LDTPGHAAFS EMRARGAAVT DIVVLVVAAD
301: DGVMPQTLEA IAHARSANVP VVVAINKCDK PGANPEKVKY QLTSEGIELE DIGGNVQAVE VSAAKSTGLD KLEEALLLQA VDMDLKARVD GPAQAYVVEA
401: RLDKGRGPLA TIIVKAGTLV RGQHVVIGCQ WGRLRAIRDM IGKTTDRATP AMPVEIEGLK GLPMAGDDVI VVESEERARM LSEGRKRKYE KDRLLKAEEA
501: RLEEAAARLE TESEEGFVRV ELPIVVKSDV QGTAQAVADA LRTLNSPQVS VNIVHSGVGA ISHSDLDLAQ ACGACIVGFN VKGGSTGNLS AAQGSVKVFH
601: HRVIYHLLED IGNLIVEKAP GVSEMEVSGE AEVLSIFKIL GKRRTEEDGV NIAGCKVMDG RVCRSGLMRL LRSGEVVFEG SCASLKREKQ DVEQVGKGNE
701: CGLVFGDWND FRVGDVIQCM EPVIRKPKFI SSESGAVRIE C

Arabidopsis Description

At4g11160 [Source:UniProtKB/TrEMBL;Acc:Q67ZW2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.