Factsheet for VIT_14s0060g02210.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48578	Soybean	cytosol, extracellular	12.69	80.7
GSMUA_Achr11P...	Banana	cytosol	62.76	77.78
PGSC0003DMT400031711	Potato	mitochondrion	74.48	73.37
Solyc08g081900.2.1	Tomato	mitochondrion	74.21	73.1
KRH68380	Soybean	mitochondrion	72.14	72.84
KRG96646	Soybean	mitochondrion	71.31	72.01
KXG26389	Sorghum	mitochondrion	69.24	70.51
Os09t0515500-01	Rice	mitochondrion	69.24	70.11
HORVU1Hr1G077340.1	Barley	mitochondrion	67.86	69.1
TraesCS1B01G345100.2	Wheat	mitochondrion	67.45	68.68
TraesCS1A01G331200.1	Wheat	mitochondrion	67.45	68.68
TraesCS1D01G333900.1	Wheat	mitochondrion	67.31	68.54
Zm00001d003556_P003	Maize	mitochondrion	68.69	67.76
Bra033153.1-P	Field mustard	cytosol	62.34	65.32
AT4G11160.2	Thale cress	plastid	64.55	62.99
CDY25276	Canola	mitochondrion	62.62	61.68
CDX94227	Canola	mitochondrion, plastid	46.48	60.5
CDY05134	Canola	mitochondrion	60.41	59.75
CDX90791	Canola	mitochondrion	59.31	58.66
Bra000738.1-P	Field mustard	cytosol	59.03	41.76
VIT_19s0027g00130.t01	Wine grape	plastid	32.97	23.55
VIT_18s0076g00310.t01	Wine grape	nucleus	19.17	10.28

Protein Annotations

EntrezGene:100266672	wikigene:100266672	MapMan:17.7.3.3	Gene3D:2.40.30.10	Gene3D:3.40.50.10050	Gene3D:3.40.50.300
ProteinID:CBI39516	ProteinID:CBI39516.3	UniProt:D7U9V2	EMBL:FN596746	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006412	GO:GO:0006413
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:IPR000795	InterPro:IPR036925	EntrezGene:LOC100266672	wikigene:LOC100266672	HAMAP:MF_00100_B
InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF11987	PFscan:PS51722	PANTHER:PTHR43381	PANTHER:PTHR43381:SF1
SUPFAM:SSF50447	SUPFAM:SSF52156	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	InterPro:TF_IF2_bacterial-like
InterPro:TIF_IF2	InterPro:TIF_IF2_dom3	InterPro:TIF_IF2_dom3_sf	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00487	InterPro:Transl_B-barrel_sf
UniParc:UPI0001BE51C7	ArrayExpress:VIT_14s0060g02210	EnsemblPlantsGene:VIT_14s0060g02210	EnsemblPlants:VIT_14s0060g02210.t01	unigene:Vvi.664	RefSeq:XP_002279490
RefSeq:XP_002279490.2	RefSeq:XP_019080883.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr14:-:1777633..1784121

Molecular Weight (calculated)

78274.6 Da

IEP (calculated)

7.367

GRAVY (calculated)

-0.156

Length

725 amino acids

Sequence
(BLAST)

001: MAWREVGKKS ICANLTKALA STKSRDVPDP LSTPILEDAL KSISSSIKHV PVFSASKSSL GADKCQILPN RPLTRRFHAS PGLLARRRSD EPFGLKTPKR
101: EKYVKRESKM QPPVEAPYVH PKPKRTTKSL PDRTIDIFEG MTIGELAKHT NESISTLQEI LVNVGEKFDS EFDTLSIDIA ELVAMETGVN VRRLHSNEGA
201: EIFPRPAVVT VMGHVDHGKT SLLDALRQTS VAAREAGGIT QHLGAFVVSM PSGASITFLD TPGHAAFSAM RARGAAVTDV VVLVVAADDG VMPQTLEAMS
301: HAKAAKVPIV VAINKCDKPA ADPERVKVQL ASEGLLLEEM GGDVQVVEVS AVNKTGLDNL EEALLLQADL MDLKARIDGP AQAYVVEARL DRGRGPLATA
401: IVKAGTLVCG QHVVVGAEWG RIRAIRDMMG NLTDKAKPAM PVEIEGLRGL PMAGDDIIVV ESEERARMLS AGRKKKYEKD RLRKIDEGRT EAPEPSEDVP
501: ERVEMPIIVK ADVQGTVQAV TDALKSLNSP QVFVNVVHVG VGPISQSDVD LAQACHACIV GFNVKNPPTS LSQAASRASI KVKIHRVIYH LLEDIGNLIV
601: DKAPGTFETQ VAGEAQVLNI FELKGRSKSK GDDVKIAGCR VIDGRVTKSS TMRLLRSGEV MFEGSCVSLK REKQDVDTVG KGNECGLVIG DWDDFQIGDV
701: IQCLEQVNRK PKFISSESGA VRIEC

Best Arabidopsis Sequence Match ( AT4G11160.1 )
(BLAST)

001: MTSRHLGKKG IQASFRIGLV LPRVVASTER QISSTVLKRA SESVSFSFAP YINGFGFSSL SNWSRSYESF PTETSIRYFH ASRETLAKRK EDADRLLSHR
101: ERKKQTVKTK GKFSKREKKT DKPPVEAPYV PPRLKRLAKG LPGKTVDIFE GMTLLELSKR TGESVAVLQS ILINVGETFS SEFDTISVDV AELLAMEIGI
201: NVRRQHSTEG SEILPRPPVV TVMGHVDHGK TSLLDALRNT SVAAREAGGI TQHVGAFVVG MPDSGTSITF LDTPGHAAFS EMRARGAAVT DIVVLVVAAD
301: DGVMPQTLEA IAHARSANVP VVVAINKCDK PGANPEKVKY QLTSEGIELE DIGGNVQAVE VSAAKSTGLD KLEEALLLQA VDMDLKARVD GPAQAYVVEA
401: RLDKGRGPLA TIIVKAGTLV RGQHVVIGCQ WGRLRAIRDM IGKTTDRATP AMPVEIEGLK GLPMAGDDVI VVESEERARM LSEGRKRKYE KDRLLKAEEA
501: RLEEAAARLE TESEEGFVRV ELPIVVKSDV QGTAQAVADA LRTLNSPQVS VNIVHSGVGA ISHSDLDLAQ ACGACIVGFN VKGGSTGNLS AAQGSVKVFH
601: HRVIYHLLED IGNLIVEKAP GVSEMEVSGE AEVLSIFKIL GKRRTEEDGV NIAGCKVMDG RVCRSGLMRL LRSGEVVFEG SCASLKREKQ DVEQVGKGNE
701: CGLVFGDWND FRVGDVIQCM EPVIRKPKFI SSESGAVRIE C

Arabidopsis Description

At4g11160 [Source:UniProtKB/TrEMBL;Acc:Q67ZW2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.