CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003556_P003	Maize	mitochondrion	93.68	90.75
Os09t0515500-01	Rice	mitochondrion	88.06	87.57
TraesCS1D01G333900.1	Wheat	mitochondrion	84.69	84.69
TraesCS1A01G331200.1	Wheat	mitochondrion	83.99	83.99
TraesCS1B01G345100.2	Wheat	mitochondrion	83.85	83.85
HORVU1Hr1G077340.1	Barley	mitochondrion	83.71	83.71
GSMUA_Achr11P...	Banana	cytosol	64.61	78.63
KRH48578	Soybean	cytosol, extracellular	12.08	75.44
VIT_14s0060g02210.t01	Wine grape	cytosol, plastid	70.51	69.24
KRG96646	Soybean	mitochondrion	65.73	65.18
Solyc08g081900.2.1	Tomato	mitochondrion	66.15	63.99
PGSC0003DMT400031711	Potato	mitochondrion	66.15	63.99
KRH68380	Soybean	mitochondrion	64.47	63.93
Bra033153.1-P	Field mustard	cytosol	59.55	61.27
CDX94227	Canola	mitochondrion, plastid	45.22	57.81
AT4G11160.2	Thale cress	plastid	58.57	56.12
CDY25276	Canola	mitochondrion	57.72	55.84
CDY05134	Canola	mitochondrion	57.16	55.53
CDX90791	Canola	mitochondrion	55.62	54.02
Bra000738.1-P	Field mustard	cytosol	55.62	38.63
KXG22198	Sorghum	plastid	31.6	23.08
OQU79180	Sorghum	nucleus	18.4	15.25
KXG22680	Sorghum	nucleus	17.13	9.44

Protein Annotations

MapMan:17.7.3.3	Gene3D:2.40.30.10	Gene3D:3.40.50.10050	Gene3D:3.40.50.300	UniProt:A0A1B6PL38	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006412
GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR000795	InterPro:IPR036925	EnsemblPlants:KXG26389	ProteinID:KXG26389
ProteinID:KXG26389.1	HAMAP:MF_00100_B	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF11987	PFscan:PS51722
PANTHER:PTHR43381	PANTHER:PTHR43381:SF1	EnsemblPlantsGene:SORBI_3006G093300	SUPFAM:SSF50447	SUPFAM:SSF52156	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	InterPro:TF_IF2_bacterial-like	InterPro:TIF_IF2	InterPro:TIF_IF2_dom3	InterPro:TIF_IF2_dom3_sf
TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00487	InterPro:Transl_B-barrel_sf	UniParc:UPI00081AE516	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:46320997..46326782

Molecular Weight (calculated)

77301.6 Da

IEP (calculated)

7.459

GRAVY (calculated)

-0.180

Length

712 amino acids

Sequence
(BLAST)

001: MAWRMLRRKD FHTGLVNLAF RKDHGAKKHF SNGTIGNLAQ LHCCDRPKHS ASCMPSNHFT IRNFHAGVYM LAWSQKREDV VGLKAPKREK RVKKENRTQP
101: PVEAPYVARK PKIPRKSLPD KTVEIFDGMT LLDLSKRTGA HISTLQGILA DLGEKVESEF DSISIDLAEL VAMELGVNTR RMHTGEGMNE PRPAVVTVMG
201: HVDHGKTSLL DALRQTSVAA KEAGGITQHI GAFVVEMPSG ASITFLDTPG HAAFSAMRAR GAAVTDIVVL VVAADDGVMP QTLEAMSHAK AANVPIVVAI
301: NKCDKSGADP ERVRIQLGSE GLLLEDMGGD VQVVEISAVA KSGLDKLEEA LLLQAEMMDL KARIDGPAQA FVVEARVDRG RGPLATAIVK YGTLVSGQHI
401: VVGAEWGRIR SLRDTAGNIT QSAKPAMPIE IEGLRGLPMA GDDVVVVDSE ERARMLSQGR KKKQEKDRLR KIDEGMAEEL EIKEETPERV EMPIIVKADV
501: QGSVQAVTDA LRSLNSAQVF VNVVHVGVGP ISQHDIDLAQ ACGAYIVGFN IRSPPISITQ AAARANIKVL LHKVIYHLLE EMGRAIVERA PGTTETQVSG
601: EAEVLNIFEL KGRSKSKGPD IKIAGCRITD GHFSKSGTMR LLRSGDVVFE GPCASLKRET QDAETIEKGN DCGLVIQDCD DFQVGDIIQC LEQVIRKPKF
701: ISTQSGSVRI EC

Best Arabidopsis Sequence Match ( AT4G11160.2 )
(BLAST)

001: MPSFLSSLFG LGIQASFRIG LVLPRVVAST ERQISSTVLK RASESVSFSF APYINGFGFS SLSNWSRSYE SFPTETSIRY FHASRETLAK RKEDADRLLS
101: HRERKKQTVK TKGKFSKREK KTDKPPVEAP YVPPRLKRLA KGLPGKTVDI FEGMTLLELS KRTGESVAVL QSILINVGET FSSEFDTISV DVAELLAMEI
201: GINVRRQHST EGSEILPRPP VVTVMGHVDH GKTSLLDALR NTSVAAREAG GITQHVGAFV VGMPDSGTSI TFLDTPGHAA FSEMRARGAA VTDIVVLVVA
301: ADDGVMPQTL EAIAHARSAN VPVVVAINKC DKPGANPEKV KYQLTSEGIE LEDIGGNVQA VEVSAAKSTG LDKLEEALLL QAVDMDLKAR VDGPAQAYVV
401: EARLDKGRGP LATIIVKAGT LVRGQHVVIG CQWGRLRAIR DMIGKTTDRA TPAMPVEIEG LKGLPMAGDD VIVVESEERA RMLSEGRKRK YEKDRLLKAE
501: EARLEEAAAR LETESEEGFV RVELPIVVKS DVQGTAQAVA DALRTLNSPQ VSVNIVHSGV GAISHSDLDL AQACGACIVG FNVKGGSTGN LSAAQGSVKV
601: FHHRVIYHLL EDIGNLIVEK APGVSEMEVS GEAEVLSIFK ILGKRRTEED GVNIAGCKVM DGRVCRSGLM RLLRSGEVVF EGSCASLKRE KQDVEQVGKG
701: NECGLVFGDW NDFRVGDVIQ CMEPVIRKPK FISSESGAVR IEC

Arabidopsis Description

At4g11160 [Source:UniProtKB/TrEMBL;Acc:Q67ZW2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.