Factsheet for Bra033153.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
extracellular 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	extracellular
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25276	Canola	mitochondrion	92.2	86.68
AT4G11160.2	Thale cress	plastid	84.25	78.47
KRH48578	Soybean	cytosol, extracellular	11.56	70.18
GSMUA_Achr11P...	Banana	cytosol	57.95	68.55
VIT_14s0060g02210.t01	Wine grape	cytosol, plastid	65.32	62.34
PGSC0003DMT400031711	Potato	mitochondrion	65.32	61.41
KRG96646	Soybean	mitochondrion	63.29	61.0
KRH68380	Soybean	mitochondrion	63.15	60.86
Solyc08g081900.2.1	Tomato	mitochondrion	64.45	60.6
Os09t0515500-01	Rice	mitochondrion	61.99	59.92
KXG26389	Sorghum	mitochondrion	61.27	59.55
Zm00001d003556_P003	Maize	mitochondrion	61.99	58.37
HORVU1Hr1G077340.1	Barley	mitochondrion	59.97	58.29
TraesCS1D01G333900.1	Wheat	mitochondrion	59.83	58.15
TraesCS1A01G331200.1	Wheat	mitochondrion	59.68	58.01
TraesCS1B01G345100.2	Wheat	mitochondrion	59.54	57.87
Bra000738.1-P	Field mustard	cytosol	79.19	53.46
Bra025989.1-P	Field mustard	plastid	33.09	22.34
Bra016612.1-P	Field mustard	plastid	32.95	22.33
Bra031112.1-P	Field mustard	cytosol	7.51	17.69
Bra031113.1-P	Field mustard	cytosol	9.54	14.54
Bra016430.1-P	Field mustard	cytosol	20.38	13.62
Bra008279.1-P	Field mustard	nucleus	19.94	10.88

Protein Annotations

MapMan:17.7.3.3	Gene3D:2.40.30.10	Gene3D:3.40.50.10050	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra033153	EnsemblPlants:Bra033153.1
EnsemblPlants:Bra033153.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003743	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR000795
InterPro:IPR036925	UniProt:M4EWG9	HAMAP:MF_00100_B	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF11987
PFscan:PS51722	PANTHER:PTHR43381	PANTHER:PTHR43381:SF1	SUPFAM:SSF50447	SUPFAM:SSF52156	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	InterPro:TF_IF2_bacterial-like	InterPro:TIF_IF2	InterPro:TIF_IF2_dom3	InterPro:TIF_IF2_dom3_sf
TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00487	InterPro:Transl_B-barrel_sf	UniParc:UPI00025455C0	SEG:seg	:

Description

AT4G11160 (E=0.0) | translation initiation factor IF-2, mitochondrial, putative

Coordinates

chrA02:-:17036093..17039093

Molecular Weight (calculated)

74523.9 Da

IEP (calculated)

6.621

GRAVY (calculated)

-0.152

Length

692 amino acids

Sequence
(BLAST)

001: MNGVEALRQE GFGFSSPNHE SFPTLTSIRC FHASRETLAR RKEDPDRQLS HRELKKQTVK TKGKFSKREK KTDKPPVEAP YVPPRLQRLA KGLAEKTVDV
101: FEGMTLLEFS KRTGESLAVL QSILLNVGET VGSEFDAISI DVAELLAMEI GINVKRQHTT EGSQILPRPP VVTVMGHVDH GKTSLLDALR NTSVAAKEAG
201: GITQHVGAFV VGMPDSGTSI TFLDTPGHAA FSEMRARGAA VTDIVVLVVA ADDGVMPQTL EAIAHARSAN VPIVVAINKC DKPGANPERV KNQLAAEGIE
301: LEDIGGNVQV VEVSAMKSTG LDKLEEALLL EAVDMDLKAR VEGPAQAYVV EARLDKGRGP LATIIVKAGT LVSGHHVVIG SQWGRLRAIR DMAGKQTDRA
401: TPAMPVEIEG LKGLPMAGDD VIVVESEERA KMLSEGRKRK YERDRLLKAE EARVAEAEKK EAESEEGFIR VELPIIVKSD VQGTAQAVAD ALRTLNSPQV
501: FVNIVHSGVG AVSHSDLERA QACGACIVAF NVKGGGSGNL SAAQASVKVF HHRVIYHLLE DIGKLIVEKA PGVSELEVAG EAEVLSIFKV LGKRRSEEDG
601: VSIAGCKVMD GRVCRSGMMR LLRSGEVLFE GSCASLKREK QDVEQVGKGN ECGLVMGEWN DFRVGDVIQC MEAVIRKPKF VSSESGAVRI EC

Best Arabidopsis Sequence Match ( AT4G11160.1 )
(BLAST)

001: MTSRHLGKKG IQASFRIGLV LPRVVASTER QISSTVLKRA SESVSFSFAP YINGFGFSSL SNWSRSYESF PTETSIRYFH ASRETLAKRK EDADRLLSHR
101: ERKKQTVKTK GKFSKREKKT DKPPVEAPYV PPRLKRLAKG LPGKTVDIFE GMTLLELSKR TGESVAVLQS ILINVGETFS SEFDTISVDV AELLAMEIGI
201: NVRRQHSTEG SEILPRPPVV TVMGHVDHGK TSLLDALRNT SVAAREAGGI TQHVGAFVVG MPDSGTSITF LDTPGHAAFS EMRARGAAVT DIVVLVVAAD
301: DGVMPQTLEA IAHARSANVP VVVAINKCDK PGANPEKVKY QLTSEGIELE DIGGNVQAVE VSAAKSTGLD KLEEALLLQA VDMDLKARVD GPAQAYVVEA
401: RLDKGRGPLA TIIVKAGTLV RGQHVVIGCQ WGRLRAIRDM IGKTTDRATP AMPVEIEGLK GLPMAGDDVI VVESEERARM LSEGRKRKYE KDRLLKAEEA
501: RLEEAAARLE TESEEGFVRV ELPIVVKSDV QGTAQAVADA LRTLNSPQVS VNIVHSGVGA ISHSDLDLAQ ACGACIVGFN VKGGSTGNLS AAQGSVKVFH
601: HRVIYHLLED IGNLIVEKAP GVSEMEVSGE AEVLSIFKIL GKRRTEEDGV NIAGCKVMDG RVCRSGLMRL LRSGEVVFEG SCASLKREKQ DVEQVGKGNE
701: CGLVFGDWND FRVGDVIQCM EPVIRKPKFI SSESGAVRIE C

Arabidopsis Description

At4g11160 [Source:UniProtKB/TrEMBL;Acc:Q67ZW2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.