CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plasma membrane 2
plastid 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96646	Soybean	mitochondrion	91.23	14.48
KRH68380	Soybean	mitochondrion	90.35	14.35
GSMUA_Achr11P...	Banana	cytosol	72.81	14.19
CDX94227	Canola	mitochondrion, plastid	68.42	14.0
VIT_14s0060g02210.t01	Wine grape	cytosol, plastid	80.7	12.69
KXG26389	Sorghum	mitochondrion	75.44	12.08
Os09t0515500-01	Rice	mitochondrion	74.56	11.87
TraesCS1D01G333900.1	Wheat	mitochondrion	73.68	11.8
TraesCS1B01G345100.2	Wheat	mitochondrion	73.68	11.8
TraesCS1A01G331200.1	Wheat	mitochondrion	73.68	11.8
Zm00001d003556_P003	Maize	mitochondrion	75.44	11.7
HORVU1Hr1G077340.1	Barley	mitochondrion	72.81	11.66
Bra033153.1-P	Field mustard	cytosol	70.18	11.56
Solyc08g081900.2.1	Tomato	mitochondrion	74.56	11.55
PGSC0003DMT400031711	Potato	mitochondrion	74.56	11.55
CDY05134	Canola	mitochondrion	70.18	10.91
CDY25276	Canola	mitochondrion	70.18	10.87
CDX90791	Canola	mitochondrion	69.3	10.78
AT4G11160.2	Thale cress	plastid	70.18	10.77
Bra000738.1-P	Field mustard	cytosol	69.3	7.71
KRH43837	Soybean	nucleus, plastid	46.49	5.25
KRH13635	Soybean	nucleus	46.49	5.22
KRG88874	Soybean	cytosol	14.91	4.39
KRG91641	Soybean	nucleus	21.93	1.85
KRH35157	Soybean	nucleus	21.05	1.79

Protein Annotations

EMBL:ACUP02004248	EnsemblPlants:KRH48578	EnsemblPlantsGene:GLYMA_07G098400	Gene3D:2.40.30.10	Gene3D:3.40.50.300	InterPro:P-loop_NTPase
InterPro:TIF_IF2	PANTHER:PTHR43381	PANTHER:PTHR43381:SF1	ProteinID:KRH48578	ProteinID:KRH48578.1	SUPFAM:SSF52540
UniParc:UPI0002951A89	UniProt:K7L0Q8	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:9261623..9261967

Molecular Weight (calculated)

12167.0 Da

IEP (calculated)

5.149

GRAVY (calculated)

0.222

Length

114 amino acids

Sequence
(BLAST)

001: MSHAKANIVP IVVAINKCDK AGANSEKVKL QLASEGLLLE EMGGDVQVVE VSATEKIGLD NLEEALLLQA DMMDLKARIH GLAQANVMEA RLDKGRGPLV
101: TTIVKAGTLF NLLF

Best Arabidopsis Sequence Match ( AT4G11160.3 )
(BLAST)

001: MPSFLSSLFG LGIQASFRIG LVLPRVVAST ERQISSTVLK RASESVSFSF APYINGFGFS SLSNWSRSYE SFPTETSIRY FHASRETLAK RKEDADRLLS
101: HRERKKQTVK TKGKFSKREK KTDKPPVEAP YVPPRLKRLA KGLPGKTVDI FEGMTLLELS KRTGESVAVL QSILINVGET FSSEFDTISV DVAELLAMEI
201: GINVRRQHST EGSEILPRPP VVTVMGHVDH GKTSLLDALR NTSVAAREAG GITQHVGAFV VGMPDSGTSI TFLDTPGHAA FSEMRARGAA VTDIVVLVVA
301: ADDGVMPQTL EAIAHARSAN VPVVVAINKC DKPGANPEKV KYQLTSEGIE LEDIGGNVQA VEVSAAKSTG LDKLEEALLL QAVDMDLKAR VDGPAQAYVV
401: EARLDKGRGP LATIIVKAGT LVRGQHVVIG CQWGRLRAIR DMIGKTTDRA TPAMPVEIEG LKGLPMAGDD VIVVESEERA RMLSEGRKRK YEKDRLLKAE
501: EARLEEAAAR LETESEEGFV RVELPIVVKS DVQGTAQAVA DALRTLNSPQ VRKTEILVYG DCGLLFCEFA YCLYCG

Arabidopsis Description

At4g11160 [Source:UniProtKB/TrEMBL;Acc:Q67ZW2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.