Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030488.1-P | Field mustard | cytosol | 99.05 | 99.05 |
| CDY62106 | Canola | cytosol | 62.18 | 97.76 |
| CDY37133 | Canola | cytosol | 94.15 | 94.0 |
| CDY22798 | Canola | cytosol | 93.83 | 93.68 |
| AT1G50480.1 | Thale cress | cytosol | 92.25 | 91.96 |
| PGSC0003DMT400081881 | Potato | cytosol | 86.08 | 85.8 |
| VIT_06s0004g01160.t01 | Wine grape | cytosol | 86.39 | 85.71 |
| Solyc01g006280.2.1 | Tomato | extracellular, nucleus | 85.92 | 85.65 |
| KRG93013 | Soybean | nucleus | 86.08 | 85.53 |
| KRH36263 | Soybean | cytosol, endoplasmic reticulum, nucleus | 85.28 | 84.75 |
| OQU89595 | Sorghum | cytosol | 84.65 | 84.25 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 78.8 | 83.98 |
| CDY62107 | Canola | plastid | 30.85 | 80.25 |
| TraesCS5A01G232800.1 | Wheat | nucleus | 85.6 | 76.2 |
| TraesCS5B01G231100.1 | Wheat | plastid | 85.44 | 75.42 |
| Os09t0446800-01 | Rice | plastid | 84.34 | 75.39 |
| TraesCS5D01G235400.2 | Wheat | plastid | 84.65 | 74.83 |
| Zm00001d020669_P001 | Maize | extracellular | 84.02 | 72.44 |
| HORVU5Hr1G058370.1 | Barley | cytosol | 42.88 | 72.07 |
| KRH33286 | Soybean | nucleus | 42.25 | 69.17 |
Protein Annotations
| KEGG:00670+6.3.4.3 | KEGG:00720+6.3.4.3 | Gene3D:1.10.8.770 | Gene3D:3.10.410.10 | MapMan:7.5.7.1 | GO:A0A078GWN0 |
| UniProt:A0A078GWN0 | EnsemblPlants:CDY29587 | ProteinID:CDY29587 | ProteinID:CDY29587.1 | InterPro:Formate_THF_ligase | InterPro:Formate_THF_ligase_CS |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004329 | GO:GO:0005488 | GO:GO:0005524 |
| EnsemblPlantsGene:GSBRNA2T00043322001 | HAMAP:MF_01543 | InterPro:P-loop_NTPase | PFAM:PF01268 | ScanProsite:PS00721 | ScanProsite:PS00722 |
| PANTHER:PTHR43274 | MetaCyc:PWY-1722 | MetaCyc:PWY-2161 | MetaCyc:PWY-2201 | MetaCyc:PWY-3841 | SUPFAM:SSF52540 |
| UniPathway:UPA00193 | UniParc:UPI0004EF0CD2 | SEG:seg | : | : | : |
Description
BnaA05g15830DBnaA05g15830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWN0]
Coordinates
chrLK032240:+:5800..8083
Molecular Weight (calculated)
67711.7 Da
IEP (calculated)
6.565
GRAVY (calculated)
-0.006
Length
632 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSRKLQVVT PVPSDIDIAN SVEPLHIAEI AKDLNLSPLH YDLYGKYKAK VLLSAFDELQ DREDGYYVVV GGITPTPLGE GKSTTTVGLC QALGAYLNKK
101: VVTCLRQPSQ GPTFGIKGGA AGGGYSQVIP MDEFNLHLTG DIHAITASNN LLAAAIDARM FHEASQSDKA LFNRLCPLNK EGKRSFTDVM FRRLRKLGIS
201: KTSPEELTPE EVRKFARLDI DPESITWRRV MDVNDRFLRK MTVGQGSEEK GMIRETGFDI SVASEIMAVL ALTTSLDDMR ESLGKMVIGN SRAGEPITAD
301: DLGVGGALTV LMKDAIHPTL MQTLEGTPVL VHAGPFANIA HGNSSIVADK IALKLVGPGG FVVTEAGFGS DIGTEKFMNI KCRYSGLRPQ CAVVVATVRA
401: LKMHGGGPGV VAGRPLDHAY VSENVSLVEA GCVNLAKHIS NVKAYGVNVV VAVNVFSTDT EAELNTVKKF SMDAGAFDAV ICSHHAHGGQ GAVDLGIAVE
501: KACQNITQPL EFLYPLDISI KEKIEAIAKS YGASGVEYSD QAEKQIEMYT QQGFSNLPIC MSKTQYSFSH DASKKGAPSG FVLPIRDVRG SIGAGFIYPL
601: VGTMSTMPGL PTRPCFYEID IDTVTGKVVG LS
101: VVTCLRQPSQ GPTFGIKGGA AGGGYSQVIP MDEFNLHLTG DIHAITASNN LLAAAIDARM FHEASQSDKA LFNRLCPLNK EGKRSFTDVM FRRLRKLGIS
201: KTSPEELTPE EVRKFARLDI DPESITWRRV MDVNDRFLRK MTVGQGSEEK GMIRETGFDI SVASEIMAVL ALTTSLDDMR ESLGKMVIGN SRAGEPITAD
301: DLGVGGALTV LMKDAIHPTL MQTLEGTPVL VHAGPFANIA HGNSSIVADK IALKLVGPGG FVVTEAGFGS DIGTEKFMNI KCRYSGLRPQ CAVVVATVRA
401: LKMHGGGPGV VAGRPLDHAY VSENVSLVEA GCVNLAKHIS NVKAYGVNVV VAVNVFSTDT EAELNTVKKF SMDAGAFDAV ICSHHAHGGQ GAVDLGIAVE
501: KACQNITQPL EFLYPLDISI KEKIEAIAKS YGASGVEYSD QAEKQIEMYT QQGFSNLPIC MSKTQYSFSH DASKKGAPSG FVLPIRDVRG SIGAGFIYPL
601: VGTMSTMPGL PTRPCFYEID IDTVTGKVVG LS
001: MSSSTRKLEV VSPVPADIDI ANSVEPLHIS EIAKDLNINP LHYDLYGKYK AKVLLSAFDE LQGQEDGYYV VVGGITPTPL GEGKSTTTVG LCQALGAYLD
101: KKVVTCLRQP SQGPTFGIKG GAAGGGYSQV IPMDEFNLHL TGDIHAITAS NNLLAAAIDT RIFHETSQSD KALFNRLCPP NKEGKRSFSD IMFRRLTKLG
201: ISKTSPEELT PEEIKKFARL DIDPASITWR RVMDVNDRFL RKITIGQGPE EKGMTRETGF DISVASEIMA VLALTTSLGD MRERLGKMVI GNSKAGDPIT
301: ADDLGVGGAL TVLMKDAINP TLMQTLEGTP VLVHAGPFAN IAHGNSSIVA DKIALKLVGP GGFVVTEAGF GSDIGTEKFM NIKCRYSGLT PQCAIVVATV
401: RALKMHGGGP DVVAGRPLDR AYVSENVSLV EAGCVNLAKH ISNTKAYGVN VIVAVNMFAT DTEAELNAVR KFSMDAGAFD AVVCSHHAHS GKGAVDLGIA
501: VEKACQNITQ PLRFLYPLDI GIKDKIEAIA KSYGASGVEY SDQAEKQIEM YTQQGFSNLP ICMSKTQYSF SHDASKKGAP SGFVLPIRDV RGSIGAGFIY
601: PLVGTMSTMP GLPTRPCFYE IDIDTETGKV RGLS
101: KKVVTCLRQP SQGPTFGIKG GAAGGGYSQV IPMDEFNLHL TGDIHAITAS NNLLAAAIDT RIFHETSQSD KALFNRLCPP NKEGKRSFSD IMFRRLTKLG
201: ISKTSPEELT PEEIKKFARL DIDPASITWR RVMDVNDRFL RKITIGQGPE EKGMTRETGF DISVASEIMA VLALTTSLGD MRERLGKMVI GNSKAGDPIT
301: ADDLGVGGAL TVLMKDAINP TLMQTLEGTP VLVHAGPFAN IAHGNSSIVA DKIALKLVGP GGFVVTEAGF GSDIGTEKFM NIKCRYSGLT PQCAIVVATV
401: RALKMHGGGP DVVAGRPLDR AYVSENVSLV EAGCVNLAKH ISNTKAYGVN VIVAVNMFAT DTEAELNAVR KFSMDAGAFD AVVCSHHAHS GKGAVDLGIA
501: VEKACQNITQ PLRFLYPLDI GIKDKIEAIA KSYGASGVEY SDQAEKQIEM YTQQGFSNLP ICMSKTQYSF SHDASKKGAP SGFVLPIRDV RGSIGAGFIY
601: PLVGTMSTMP GLPTRPCFYE IDIDTETGKV RGLS
Arabidopsis Description
THFSFormate--tetrahydrofolate ligase [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.