Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G231100.1 | Wheat | plastid | 96.64 | 96.51 |
| TraesCS5A01G232800.1 | Wheat | nucleus | 95.38 | 96.06 |
| HORVU5Hr1G066960.2 | Barley | plastid | 95.66 | 94.87 |
| OQU89595 | Sorghum | cytosol | 82.1 | 92.44 |
| Os09t0446800-01 | Rice | plastid | 86.71 | 87.69 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 72.45 | 87.35 |
| CDY62106 | Canola | cytosol | 48.11 | 85.57 |
| VIT_06s0004g01160.t01 | Wine grape | cytosol | 76.22 | 85.56 |
| KRG93013 | Soybean | nucleus | 76.08 | 85.53 |
| AT1G50480.1 | Thale cress | cytosol | 75.38 | 85.02 |
| CDY37133 | Canola | cytosol | 75.24 | 84.99 |
| Bra018851.1-P | Field mustard | cytosol | 75.24 | 84.99 |
| KRH36263 | Soybean | cytosol, endoplasmic reticulum, nucleus | 75.52 | 84.91 |
| CDY22798 | Canola | cytosol | 75.1 | 84.83 |
| Solyc01g006280.2.1 | Tomato | extracellular, nucleus | 75.1 | 84.7 |
| CDY29587 | Canola | cytosol | 74.83 | 84.65 |
| Bra030488.1-P | Field mustard | cytosol | 74.69 | 84.49 |
| PGSC0003DMT400081881 | Potato | cytosol | 74.69 | 84.23 |
| Zm00001d020669_P001 | Maize | extracellular | 85.59 | 83.49 |
| AT2G12280.1 | Thale cress | plastid | 9.37 | 74.44 |
| AT2G12200.1 | Thale cress | mitochondrion, plastid | 6.29 | 71.43 |
| KRH33286 | Soybean | nucleus | 37.9 | 70.21 |
| CDY62107 | Canola | plastid | 23.78 | 69.96 |
Protein Annotations
| KEGG:00670+6.3.4.3 | KEGG:00720+6.3.4.3 | Gene3D:1.10.8.770 | Gene3D:3.10.410.10 | MapMan:7.5.7.1 | InterPro:Formate_THF_ligase |
| InterPro:Formate_THF_ligase_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004329 | GO:GO:0005488 |
| GO:GO:0005524 | HAMAP:MF_01543 | InterPro:P-loop_NTPase | PFAM:PF01268 | ScanProsite:PS00721 | ScanProsite:PS00722 |
| PANTHER:PTHR43274 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS5D01G235400 | EnsemblPlants:TraesCS5D01G235400.2 | TIGR:cd00477 | SEG:seg |
Description
No Description!
Coordinates
chr5D:-:344427410..344431138
Molecular Weight (calculated)
76259.5 Da
IEP (calculated)
8.338
GRAVY (calculated)
-0.016
Length
715 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLPAPPTSD PRTLSSIILS RRRADARARI NKCSATASQR LLSPPPPLPR HHSLLRLRPG RERPAVARSS AVSAPPLVPP MTTPAPNPTI RRLDVASPVP
101: ADIDIANAVE PLHIADIAAE LGVPPEHYDL YGKYKAKVLL SVLDKLQGQQ DGYYVVVGGI TPTPLGEGKS TTTVGLCQAL GAFLDKKVVT CVRQPSQGPT
201: FGIKGGAAGG GYSQVIPMDE FNLHMTGDIH AITAANNLLA AAIDTRIFHE ASQSDKALFN RLCPANKEGK RRFADVMLRR LIKLGISKTD PDELTPEEVR
301: RFARLDIDPA SITWRRVMDV NDRFLRKITV GQGPDEKGMV RETGFDISVA SEIMAVLALT TSLADMRERL GRMVIGNSKA GEPVTADDLG LGGALTVLMK
401: DAIHPTLMQT LEGTPVLVHA GPFANIAHGN SSIVADKIAL KLVGKGGFVV TEAGFGADIG TEKFMDIKCR YSGLTPQCAI IVATIRALKM HGGGPDVVAG
501: KPLDHAYVSE NVTLVEAGCV NLAKHISNTK GYGVNVVVAI NKFATDTDAE MEVVKKAAMA AGAFDAVVCS HHAHGGKGAV DLGVAVQRAC ESQAEPLKFL
601: YPLDSSIKEK IESIAKFYGA SGVEYSEQIE MYTKQGFSNL PICMAKTQYS FSHVPSMKGA PSDFVLPIRD VRASIGAGFI YPLVGTMSTM PGLPTRPCFY
701: EIDIDTATGK VMGLS
101: ADIDIANAVE PLHIADIAAE LGVPPEHYDL YGKYKAKVLL SVLDKLQGQQ DGYYVVVGGI TPTPLGEGKS TTTVGLCQAL GAFLDKKVVT CVRQPSQGPT
201: FGIKGGAAGG GYSQVIPMDE FNLHMTGDIH AITAANNLLA AAIDTRIFHE ASQSDKALFN RLCPANKEGK RRFADVMLRR LIKLGISKTD PDELTPEEVR
301: RFARLDIDPA SITWRRVMDV NDRFLRKITV GQGPDEKGMV RETGFDISVA SEIMAVLALT TSLADMRERL GRMVIGNSKA GEPVTADDLG LGGALTVLMK
401: DAIHPTLMQT LEGTPVLVHA GPFANIAHGN SSIVADKIAL KLVGKGGFVV TEAGFGADIG TEKFMDIKCR YSGLTPQCAI IVATIRALKM HGGGPDVVAG
501: KPLDHAYVSE NVTLVEAGCV NLAKHISNTK GYGVNVVVAI NKFATDTDAE MEVVKKAAMA AGAFDAVVCS HHAHGGKGAV DLGVAVQRAC ESQAEPLKFL
601: YPLDSSIKEK IESIAKFYGA SGVEYSEQIE MYTKQGFSNL PICMAKTQYS FSHVPSMKGA PSDFVLPIRD VRASIGAGFI YPLVGTMSTM PGLPTRPCFY
701: EIDIDTATGK VMGLS
001: MSSSTRKLEV VSPVPADIDI ANSVEPLHIS EIAKDLNINP LHYDLYGKYK AKVLLSAFDE LQGQEDGYYV VVGGITPTPL GEGKSTTTVG LCQALGAYLD
101: KKVVTCLRQP SQGPTFGIKG GAAGGGYSQV IPMDEFNLHL TGDIHAITAS NNLLAAAIDT RIFHETSQSD KALFNRLCPP NKEGKRSFSD IMFRRLTKLG
201: ISKTSPEELT PEEIKKFARL DIDPASITWR RVMDVNDRFL RKITIGQGPE EKGMTRETGF DISVASEIMA VLALTTSLGD MRERLGKMVI GNSKAGDPIT
301: ADDLGVGGAL TVLMKDAINP TLMQTLEGTP VLVHAGPFAN IAHGNSSIVA DKIALKLVGP GGFVVTEAGF GSDIGTEKFM NIKCRYSGLT PQCAIVVATV
401: RALKMHGGGP DVVAGRPLDR AYVSENVSLV EAGCVNLAKH ISNTKAYGVN VIVAVNMFAT DTEAELNAVR KFSMDAGAFD AVVCSHHAHS GKGAVDLGIA
501: VEKACQNITQ PLRFLYPLDI GIKDKIEAIA KSYGASGVEY SDQAEKQIEM YTQQGFSNLP ICMSKTQYSF SHDASKKGAP SGFVLPIRDV RGSIGAGFIY
601: PLVGTMSTMP GLPTRPCFYE IDIDTETGKV RGLS
101: KKVVTCLRQP SQGPTFGIKG GAAGGGYSQV IPMDEFNLHL TGDIHAITAS NNLLAAAIDT RIFHETSQSD KALFNRLCPP NKEGKRSFSD IMFRRLTKLG
201: ISKTSPEELT PEEIKKFARL DIDPASITWR RVMDVNDRFL RKITIGQGPE EKGMTRETGF DISVASEIMA VLALTTSLGD MRERLGKMVI GNSKAGDPIT
301: ADDLGVGGAL TVLMKDAINP TLMQTLEGTP VLVHAGPFAN IAHGNSSIVA DKIALKLVGP GGFVVTEAGF GSDIGTEKFM NIKCRYSGLT PQCAIVVATV
401: RALKMHGGGP DVVAGRPLDR AYVSENVSLV EAGCVNLAKH ISNTKAYGVN VIVAVNMFAT DTEAELNAVR KFSMDAGAFD AVVCSHHAHS GKGAVDLGIA
501: VEKACQNITQ PLRFLYPLDI GIKDKIEAIA KSYGASGVEY SDQAEKQIEM YTQQGFSNLP ICMSKTQYSF SHDASKKGAP SGFVLPIRDV RGSIGAGFIY
601: PLVGTMSTMP GLPTRPCFYE IDIDTETGKV RGLS
Arabidopsis Description
THFSFormate--tetrahydrofolate ligase [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.