Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37133 | Canola | cytosol | 99.84 | 99.84 |
| CDY22798 | Canola | cytosol | 99.37 | 99.37 |
| AT1G50480.1 | Thale cress | cytosol | 95.89 | 95.74 |
| Bra030488.1-P | Field mustard | cytosol | 94.31 | 94.46 |
| VIT_06s0004g01160.t01 | Wine grape | cytosol | 88.31 | 87.76 |
| Solyc01g006280.2.1 | Tomato | extracellular, nucleus | 87.2 | 87.07 |
| PGSC0003DMT400081881 | Potato | cytosol | 87.05 | 86.91 |
| KRG93013 | Soybean | nucleus | 87.2 | 86.79 |
| KRH36263 | Soybean | cytosol, endoplasmic reticulum, nucleus | 86.1 | 85.69 |
| OQU89595 | Sorghum | cytosol | 85.94 | 85.67 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 79.78 | 85.16 |
| Os09t0446800-01 | Rice | plastid | 85.62 | 76.66 |
| TraesCS5A01G232800.1 | Wheat | nucleus | 85.94 | 76.62 |
| TraesCS5B01G231100.1 | Wheat | plastid | 85.78 | 75.84 |
| TraesCS5D01G235400.2 | Wheat | plastid | 84.99 | 75.24 |
| HORVU5Hr1G058370.1 | Barley | cytosol | 44.23 | 74.47 |
| Zm00001d020669_P001 | Maize | extracellular | 85.62 | 73.94 |
| KRH33286 | Soybean | nucleus | 42.81 | 70.21 |
Protein Annotations
| KEGG:00670+6.3.4.3 | KEGG:00720+6.3.4.3 | Gene3D:1.10.8.770 | Gene3D:3.10.410.10 | MapMan:7.5.7.1 | EnsemblPlantsGene:Bra018851 |
| EnsemblPlants:Bra018851.1 | EnsemblPlants:Bra018851.1-P | InterPro:Formate_THF_ligase | InterPro:Formate_THF_ligase_CS | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004329 | GO:GO:0005488 | GO:GO:0005524 | UniProt:M4DQQ8 | HAMAP:MF_01543 |
| InterPro:P-loop_NTPase | PFAM:PF01268 | ScanProsite:PS00721 | ScanProsite:PS00722 | PANTHER:PTHR43274 | SUPFAM:SSF52540 |
| UniParc:UPI000253EAEE | SEG:seg | : | : | : | : |
Description
AT1G50480 (E=0.0) THFS | THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE); ATP binding / copper ion binding / formate-tetrahydrofolate ligase
Coordinates
chrA06:-:1604848..1607852
Molecular Weight (calculated)
67755.8 Da
IEP (calculated)
7.012
GRAVY (calculated)
-0.022
Length
633 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSRKLQVV SPVPADIDIA NSVEPLHIAE IAKDLNLSPL HYDLYGKYKA KVLLSAFDEL KDREDGYYVV VGGITPTPLG EGKSTTTVGL CQALGAYLDK
101: KVVTCLRQPS QGPTFGIKGG AAGGGYSQVI PMDEFNLHLT GDIHAITASN NLLAAAIDTR IFHEASQSDK ALFNRLCPVN KEGKRSFSDI MFRRLTKLGI
201: SKTSPEELTP EEVKKFARLD IDPDSITWRR VMDVNDRFLR KITVGQGPEE KGMTRETGFD ISVASEIMAV LALTTSLGDM RERLGKMVIG NSKAGEPITA
301: DDLGVGGALT VLMKDAIHPT LMQTLEGTPV LVHAGPFANI AHGNSSIVAD KIALKLVGPG GFVVTEAGFG SDIGTEKFMN IKCRYSGLTP QCAIVVATVR
401: ALKMHGGGPD VVAGRPLDRA YVSENVSLVE AGCVNLAKHI ANTKAYGVNV VVAVNMFSTD SEAELNAVRK FSMDAGAFDA VICSHHAHGG KGAVDLGIAV
501: EKACQNITQP LRFLYPLEIS IKDKIEAIAK SYGASGVEYS DQAEKQIEMY TQQGFSNLPI CMSKTQYSFS HDASKKGAPT GFVLPIRDVR GSIGAGFIYP
601: LVGTMSTMPG LPTRPCFYEI DIDTVTGKVR GLS
101: KVVTCLRQPS QGPTFGIKGG AAGGGYSQVI PMDEFNLHLT GDIHAITASN NLLAAAIDTR IFHEASQSDK ALFNRLCPVN KEGKRSFSDI MFRRLTKLGI
201: SKTSPEELTP EEVKKFARLD IDPDSITWRR VMDVNDRFLR KITVGQGPEE KGMTRETGFD ISVASEIMAV LALTTSLGDM RERLGKMVIG NSKAGEPITA
301: DDLGVGGALT VLMKDAIHPT LMQTLEGTPV LVHAGPFANI AHGNSSIVAD KIALKLVGPG GFVVTEAGFG SDIGTEKFMN IKCRYSGLTP QCAIVVATVR
401: ALKMHGGGPD VVAGRPLDRA YVSENVSLVE AGCVNLAKHI ANTKAYGVNV VVAVNMFSTD SEAELNAVRK FSMDAGAFDA VICSHHAHGG KGAVDLGIAV
501: EKACQNITQP LRFLYPLEIS IKDKIEAIAK SYGASGVEYS DQAEKQIEMY TQQGFSNLPI CMSKTQYSFS HDASKKGAPT GFVLPIRDVR GSIGAGFIYP
601: LVGTMSTMPG LPTRPCFYEI DIDTVTGKVR GLS
001: MSSSTRKLEV VSPVPADIDI ANSVEPLHIS EIAKDLNINP LHYDLYGKYK AKVLLSAFDE LQGQEDGYYV VVGGITPTPL GEGKSTTTVG LCQALGAYLD
101: KKVVTCLRQP SQGPTFGIKG GAAGGGYSQV IPMDEFNLHL TGDIHAITAS NNLLAAAIDT RIFHETSQSD KALFNRLCPP NKEGKRSFSD IMFRRLTKLG
201: ISKTSPEELT PEEIKKFARL DIDPASITWR RVMDVNDRFL RKITIGQGPE EKGMTRETGF DISVASEIMA VLALTTSLGD MRERLGKMVI GNSKAGDPIT
301: ADDLGVGGAL TVLMKDAINP TLMQTLEGTP VLVHAGPFAN IAHGNSSIVA DKIALKLVGP GGFVVTEAGF GSDIGTEKFM NIKCRYSGLT PQCAIVVATV
401: RALKMHGGGP DVVAGRPLDR AYVSENVSLV EAGCVNLAKH ISNTKAYGVN VIVAVNMFAT DTEAELNAVR KFSMDAGAFD AVVCSHHAHS GKGAVDLGIA
501: VEKACQNITQ PLRFLYPLDI GIKDKIEAIA KSYGASGVEY SDQAEKQIEM YTQQGFSNLP ICMSKTQYSF SHDASKKGAP SGFVLPIRDV RGSIGAGFIY
601: PLVGTMSTMP GLPTRPCFYE IDIDTETGKV RGLS
101: KKVVTCLRQP SQGPTFGIKG GAAGGGYSQV IPMDEFNLHL TGDIHAITAS NNLLAAAIDT RIFHETSQSD KALFNRLCPP NKEGKRSFSD IMFRRLTKLG
201: ISKTSPEELT PEEIKKFARL DIDPASITWR RVMDVNDRFL RKITIGQGPE EKGMTRETGF DISVASEIMA VLALTTSLGD MRERLGKMVI GNSKAGDPIT
301: ADDLGVGGAL TVLMKDAINP TLMQTLEGTP VLVHAGPFAN IAHGNSSIVA DKIALKLVGP GGFVVTEAGF GSDIGTEKFM NIKCRYSGLT PQCAIVVATV
401: RALKMHGGGP DVVAGRPLDR AYVSENVSLV EAGCVNLAKH ISNTKAYGVN VIVAVNMFAT DTEAELNAVR KFSMDAGAFD AVVCSHHAHS GKGAVDLGIA
501: VEKACQNITQ PLRFLYPLDI GIKDKIEAIA KSYGASGVEY SDQAEKQIEM YTQQGFSNLP ICMSKTQYSF SHDASKKGAP SGFVLPIRDV RGSIGAGFIY
601: PLVGTMSTMP GLPTRPCFYE IDIDTETGKV RGLS
Arabidopsis Description
THFSFormate--tetrahydrofolate ligase [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.