Factsheet for HORVU5Hr1G058370.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g01160.t01	Wine grape	cytosol	76.6	45.21
KRH33286	Soybean	nucleus	46.28	45.08
PGSC0003DMT400081881	Potato	cytosol	75.27	44.64
Solyc01g006280.2.1	Tomato	extracellular, nucleus	75.0	44.48
Bra018851.1-P	Field mustard	cytosol	74.47	44.23
CDY37133	Canola	cytosol	74.47	44.23
CDY22798	Canola	cytosol	74.2	44.08
KRG93013	Soybean	nucleus	74.47	44.03
KRH36263	Soybean	cytosol, endoplasmic reticulum, nucleus	74.47	44.03
Bra030488.1-P	Field mustard	cytosol	72.61	43.2
CDY29587	Canola	cytosol	72.07	42.88
CDY62106	Canola	cytosol	42.29	39.55
HORVU5Hr1G066960.2	Barley	plastid	73.14	38.14
CDY62107	Canola	plastid	23.14	35.8
AT2G12280.1	Thale cress	plastid	1.33	5.56
AT2G12200.1	Thale cress	mitochondrion, plastid	0.27	1.59

Protein Annotations

EnsemblPlants:HORVU5Hr1G058370.1	EnsemblPlantsGene:HORVU5Hr1G058370	Gene3D:1.10.8.770	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004329	GO:GO:0005488	GO:GO:0005524	InterPro:Formate_THF_ligase	InterPro:Formate_THF_ligase_CS
InterPro:P-loop_NTPase	KEGG:00670+6.3.4.3	KEGG:00720+6.3.4.3	PANTHER:PTHR43274	PFAM:PF01268	ScanProsite:PS00721
SEG:seg	SUPFAM:SSF52540	UniParc:UPI000B47BB33	UniProt:A0A287RDG6	MapMan:7.5.7.1	:

Description

No Description!

Coordinates

chrchr5H:-:456549514..456551002

Molecular Weight (calculated)

33447.7 Da

IEP (calculated)

7.463

GRAVY (calculated)

-0.005

Length

376 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXMNVVTCLR QPSQGPTFGI KGGAAGGGYS QVIPMDEFNL HLTGDIHAIT AANNLLAAAI DTRIFHESTQ
101: SDKALLNRLC PPSKEGQRCF NDIMFRRLKK LGISKTRPED LTPQEVKKFA RLDIDPDSIT WRRVMDVNDR FLRKITIGQG PEEKGMVRET GFDISVASEI
201: MAVLALTTSL ADMRERLGKM VIGNSKAGDP ITADDLGLGG ALTVLMKDAI NPTLMQTLEG TPVLVHAGPF ANIAHGNSSI VADKIALKLV GPGGFVVTEA
301: GFGADIGTEK FMNIKCRYSG LTPQCAVIVA TXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXGVLASF TRYEIE

Best Arabidopsis Sequence Match ( AT1G50480.1 )
(BLAST)

001: MSSSTRKLEV VSPVPADIDI ANSVEPLHIS EIAKDLNINP LHYDLYGKYK AKVLLSAFDE LQGQEDGYYV VVGGITPTPL GEGKSTTTVG LCQALGAYLD
101: KKVVTCLRQP SQGPTFGIKG GAAGGGYSQV IPMDEFNLHL TGDIHAITAS NNLLAAAIDT RIFHETSQSD KALFNRLCPP NKEGKRSFSD IMFRRLTKLG
201: ISKTSPEELT PEEIKKFARL DIDPASITWR RVMDVNDRFL RKITIGQGPE EKGMTRETGF DISVASEIMA VLALTTSLGD MRERLGKMVI GNSKAGDPIT
301: ADDLGVGGAL TVLMKDAINP TLMQTLEGTP VLVHAGPFAN IAHGNSSIVA DKIALKLVGP GGFVVTEAGF GSDIGTEKFM NIKCRYSGLT PQCAIVVATV
401: RALKMHGGGP DVVAGRPLDR AYVSENVSLV EAGCVNLAKH ISNTKAYGVN VIVAVNMFAT DTEAELNAVR KFSMDAGAFD AVVCSHHAHS GKGAVDLGIA
501: VEKACQNITQ PLRFLYPLDI GIKDKIEAIA KSYGASGVEY SDQAEKQIEM YTQQGFSNLP ICMSKTQYSF SHDASKKGAP SGFVLPIRDV RGSIGAGFIY
601: PLVGTMSTMP GLPTRPCFYE IDIDTETGKV RGLS

Arabidopsis Description

THFSFormate--tetrahydrofolate ligase [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.