Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G12200.1 | Thale cress | mitochondrion, plastid | 56.67 | 80.95 |
| AT1G50480.1 | Thale cress | cytosol | 82.22 | 11.67 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 72.22 | 10.96 |
| PGSC0003DMT400081881 | Potato | cytosol | 76.67 | 10.88 |
| Solyc01g006280.2.1 | Tomato | extracellular, nucleus | 76.67 | 10.88 |
| OQU89595 | Sorghum | cytosol | 73.33 | 10.39 |
| VIT_06s0004g01160.t01 | Wine grape | cytosol | 72.22 | 10.2 |
| KRG93013 | Soybean | nucleus | 70.0 | 9.91 |
| KRH36263 | Soybean | cytosol, endoplasmic reticulum, nucleus | 68.89 | 9.75 |
| TraesCS5A01G232800.1 | Wheat | nucleus | 75.56 | 9.58 |
| Os09t0446800-01 | Rice | plastid | 74.44 | 9.48 |
| TraesCS5D01G235400.2 | Wheat | plastid | 74.44 | 9.37 |
| TraesCS5B01G231100.1 | Wheat | plastid | 74.44 | 9.36 |
| Zm00001d020669_P001 | Maize | extracellular | 71.11 | 8.73 |
| HORVU5Hr1G058370.1 | Barley | cytosol | 5.56 | 1.33 |
| KRH33286 | Soybean | nucleus | 5.56 | 1.3 |
Protein Annotations
| KEGG:00670+6.3.4.3 | KEGG:00720+6.3.4.3 | Gene3D:3.10.410.10 | MapMan:35.1 | EntrezGene:815699 | ProteinID:AAC97246.1 |
| ProteinID:AEC06194.1 | ArrayExpress:AT2G12280 | EnsemblPlantsGene:AT2G12280 | RefSeq:AT2G12280 | TAIR:AT2G12280 | RefSeq:AT2G12280-TAIR-G |
| EnsemblPlants:AT2G12280.1 | TAIR:AT2G12280.1 | Unigene:At.52717 | InterPro:Formate_THF_ligase | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004329 | GO:GO:0004477 | GO:GO:0004488 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006730 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0055114 | RefSeq:NP_178929.1 |
| InterPro:P-loop_NTPase | PFAM:PF01268 | PANTHER:PTHR43274 | UniProt:Q9ZUP9 | SUPFAM:SSF52540 | UniParc:UPI000009FD97 |
Description
10-formyltetrahydrofolate synthetase [Source:UniProtKB/TrEMBL;Acc:Q9ZUP9]
Coordinates
chr2:+:4922282..4922679
Molecular Weight (calculated)
9893.0 Da
IEP (calculated)
9.934
GRAVY (calculated)
-0.173
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MYTQQGFSNL PICMSKTQYS FSHDASKKGA PSGFVLPIRD VRGSIGAGFI YPLVGTMSTM PGLPTRPCFY EIDISQSFKA SLHRRSSLPQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.