Factsheet for Os09t0446800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU89595	Sorghum	cytosol	85.57	95.28
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	74.54	88.87
TraesCS5A01G232800.1	Wheat	nucleus	88.4	88.03
HORVU5Hr1G066960.2	Barley	plastid	89.11	87.38
TraesCS5B01G231100.1	Wheat	plastid	88.26	87.15
TraesCS5D01G235400.2	Wheat	plastid	87.69	86.71
VIT_06s0004g01160.t01	Wine grape	cytosol	77.65	86.19
KRG93013	Soybean	nucleus	77.37	86.01
KRH36263	Soybean	cytosol, endoplasmic reticulum, nucleus	77.23	85.85
Bra018851.1-P	Field mustard	cytosol	76.66	85.62
CDY37133	Canola	cytosol	76.66	85.62
CDY62106	Canola	cytosol	48.66	85.57
CDY22798	Canola	cytosol	76.52	85.47
AT1G50480.1	Thale cress	cytosol	76.52	85.33
Solyc01g006280.2.1	Tomato	extracellular, nucleus	76.1	84.86
Zm00001d020669_P001	Maize	extracellular	87.98	84.86
PGSC0003DMT400081881	Potato	cytosol	75.81	84.54
CDY29587	Canola	cytosol	75.39	84.34
Bra030488.1-P	Field mustard	cytosol	75.39	84.34
AT2G12280.1	Thale cress	plastid	9.48	74.44
AT2G12200.1	Thale cress	mitochondrion, plastid	6.51	73.02
CDY62107	Canola	plastid	23.9	69.55
KRH33286	Soybean	nucleus	37.91	69.43

Protein Annotations

KEGG:00670+6.3.4.3	KEGG:00720+6.3.4.3	Gene3D:1.10.8.770	Gene3D:3.10.410.10	EntrezGene:4347204	MapMan:7.5.7.1
ProteinID:BAF25224.1	ProteinID:BAT08347.1	InterPro:Formate_THF_ligase	InterPro:Formate_THF_ligase_CS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004329	GO:GO:0004477	GO:GO:0004488	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009113	GO:GO:0009257	GO:GO:0009987	GO:GO:0016787
GO:GO:0055114	HAMAP:MF_01543	EnsemblPlantsGene:Os09g0446800	EnsemblPlants:Os09t0446800-01	InterPro:P-loop_NTPase	PFAM:PF01268
ScanProsite:PS00721	ScanProsite:PS00722	PANTHER:PTHR43274	UniProt:Q0J1E1	SUPFAM:SSF52540	UniParc:UPI0000DD974F
RefSeq:XP_015612110.1	SEG:seg	:	:	:	:

Description

Similar to Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (10-formyletrahydrofolate synthetase) (FHS) (FTHFS). (Os09t0446800-01);Similar to THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE); ATP binding / formate-tetrahydrofolate ligase. (Os09t0446800-02)

Coordinates

chr9:+:16654816..16658620

Molecular Weight (calculated)

75523.6 Da

IEP (calculated)

8.177

GRAVY (calculated)

-0.003

Length

707 amino acids

Sequence
(BLAST)

001: MDVSVPPTNY PKSLSSIIKC HRRRAAINNC HSVVSHPPLS HSNHHHRSLR VRSSAAVAPP LPPPLVVPMT TPKPSPTIRR LDVASPVPAD IDIANAVSPL
101: PIADIAAELG LRPEHFDLYG KYKAKVLLSV LDELKGQQDG YYVVVGGITP TPLGEGKSTT TVGLCQALGA FLDKKVVTCL RQPSQGPTFG IKGGAAGGGY
201: SQVIPMDEFN LHLTGDIHAI TAANNLLAAA IDTRIFHEAS QSDKALFNRL CPPNKEGKRR FADVMLRRLI KLGISKTDPN ELTPDEVRRF ARLDIDPESI
301: TWRRVMDVND RFLRKITIGQ GPDEKGMVRE TGFDIAVASE IMAVLALTTS LADMRERLGR MVIGNSKAGE PITADDLGVG GALTVLMKDA IHPTLMQTLE
401: GTPVLVHAGP FANIAHGNSS IVADKIALKL VGKGGYVVTE AGFGSDIGTE KFMDIKCRYS GLMPQCAIIV ATIRALKMHG GGPDVVAGKP LDHAYVSENV
501: ALVEAGCVNL AKHIANTKSY GVNVVVAINK FASDTEAEMD VVRNASLAAG AFDAVVCTHH AHGGKGAVDL GLAVQRACES QADPLKFLYP LESGIKEKIE
601: SIAKFYGASG VEYSEQAEKQ IEMYTKQGFS NLPICMAKTQ YSFSHVPSMK GAPSGFVLPI RDVRASIGAG FIYPLVGTMS TMPGLPTRPC FYEIDVDTAT
701: GKVMGLS

Best Arabidopsis Sequence Match ( AT1G50480.1 )
(BLAST)

001: MSSSTRKLEV VSPVPADIDI ANSVEPLHIS EIAKDLNINP LHYDLYGKYK AKVLLSAFDE LQGQEDGYYV VVGGITPTPL GEGKSTTTVG LCQALGAYLD
101: KKVVTCLRQP SQGPTFGIKG GAAGGGYSQV IPMDEFNLHL TGDIHAITAS NNLLAAAIDT RIFHETSQSD KALFNRLCPP NKEGKRSFSD IMFRRLTKLG
201: ISKTSPEELT PEEIKKFARL DIDPASITWR RVMDVNDRFL RKITIGQGPE EKGMTRETGF DISVASEIMA VLALTTSLGD MRERLGKMVI GNSKAGDPIT
301: ADDLGVGGAL TVLMKDAINP TLMQTLEGTP VLVHAGPFAN IAHGNSSIVA DKIALKLVGP GGFVVTEAGF GSDIGTEKFM NIKCRYSGLT PQCAIVVATV
401: RALKMHGGGP DVVAGRPLDR AYVSENVSLV EAGCVNLAKH ISNTKAYGVN VIVAVNMFAT DTEAELNAVR KFSMDAGAFD AVVCSHHAHS GKGAVDLGIA
501: VEKACQNITQ PLRFLYPLDI GIKDKIEAIA KSYGASGVEY SDQAEKQIEM YTQQGFSNLP ICMSKTQYSF SHDASKKGAP SGFVLPIRDV RGSIGAGFIY
601: PLVGTMSTMP GLPTRPCFYE IDIDTETGKV RGLS

Arabidopsis Description

THFSFormate--tetrahydrofolate ligase [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.