CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036641.1-P	Field mustard	nucleus	83.09	95.76
CDX94564	Canola	nucleus	61.76	42.21
CDY04809	Canola	nucleus	61.76	42.21
CDX92099	Canola	nucleus	69.85	14.77
CDX95901	Canola	nucleus	70.59	14.7
HORVU5Hr1G116000.1	Barley	cytosol, plastid, vacuole	16.91	14.02
AT3G16810.1	Thale cress	nucleus	63.97	13.57
GSMUA_Achr1P26600_001	Banana	extracellular	19.85	12.74
HORVU5Hr1G115980.56	Barley	endoplasmic reticulum	39.71	10.65
Os03t0831100-01	Rice	nucleus	47.79	9.86
VIT_05s0077g01770.t01	Wine grape	plastid	47.79	9.82
KRH02300	Soybean	nucleus	44.85	9.58
PGSC0003DMT400003012	Potato	nucleus	43.38	9.52
Solyc01g065580.2.1	Tomato	nucleus	42.65	9.35
KRH50793	Soybean	endoplasmic reticulum	43.38	9.31
TraesCS4B01G020400.1	Wheat	nucleus	31.62	8.92
TraesCS5D01G508700.1	Wheat	nucleus	41.18	8.56
EER90567	Sorghum	cytosol	40.44	8.44
TraesCS4A01G364800.1	Wheat	nucleus	40.44	8.41
GSMUA_Achr1P26570_001	Banana	nucleus	41.91	8.39
TraesCS5B01G508700.1	Wheat	cytosol	40.44	8.38
HORVU5Hr1G070120.8	Barley	cytosol, nucleus, plasma membrane	41.18	8.2
HORVU5Hr1G116320.7	Barley	cytosol, nucleus	40.44	8.2
Zm00001d034750_P004	Maize	nucleus	41.18	8.08
TraesCS5D01G508600.2	Wheat	cytosol, nucleus, plasma membrane	39.71	7.24
TraesCS4A01G364900.3	Wheat	nucleus	39.71	6.98
TraesCS5D01G508500.3	Wheat	nucleus	38.24	6.79
TraesCS6D01G249500.1	Wheat	plastid	36.76	6.76
TraesCS5B01G508600.1	Wheat	nucleus	37.5	6.61
GSMUA_Achr1P26590_001	Banana	nucleus	25.74	6.13
KRH65810	Soybean	nucleus	0.0	0.0
Zm00001d017902_P001	Maize	nucleus	0.0	0.0
KRG88602	Soybean	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:CDY34785	EnsemblPlantsGene:GSBRNA2T00057330001	ProteinID:CDY34785	ProteinID:CDY34785.1	UniParc:UPI0004EE2148	UniProt:A0A078H8F3
MapMan:35.1	:	:	:	:	:

Description

BnaA09g41520DBnaA09g41520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8F3]

Coordinates

chrLK032341:-:269479..274181

Molecular Weight (calculated)

15653.9 Da

IEP (calculated)

8.200

GRAVY (calculated)

-0.396

Length

136 amino acids

Sequence
(BLAST)

001: MLYIYIYVLP VLTYGFKFFL QNGRRPLLQL LHPNSSRYFS RDDLASLDLI SLRQRTQMAK KEKDKQEDTV TEQSGLEENL IALSGKCRSW AQGHCSRILS
101: AFVETQDVQV REMAKEELQV LVDEGALKIT GTKKPE

Best Arabidopsis Sequence Match ( AT3G16810.1 )
(BLAST)

001: MSSKGLKPQK STKRKDTDSS AKFDSLKSKK PKLVSGEQQQ HVKPKFGKPK SAGDKEQSTN LSKKERRVQA KELTEARKKK RKPHYNLEQE LVSLWEKMRR
101: RNIGKEDRSK LISEAIRKMK GKVPEIAVSH VSSRVLQTCV KFCSQAEKDV LFTELQPQFL NLASNKYAVH FIQKMLDGAS KQQLAACISS LRGHVAPLLR
201: HVFGSLVVEH AYHLGSAAQK QELLAELYST ELQLFKGLTT SNEKTVVDII AKLGLQKGAV NRHMTAIIQP ILEKGIVDHT ITHKLLIEYL TIADKTSAAD
301: VLQLLTGSLL LRMVHTRDGS RLAMLSIKHG SAKERKKIIK AMKEHVKKMA FDQFGSMVLA CIFSIVDDTK LVTKIIVREL EATLKDLVMD KNGRRPLLQL
401: LHPNSSRYLS HDDLAALDLS VPSLCSMDKS ETSSKTKDTD GNEIGEETKD EQEDTVAEHS DHEENVTAMG GKKDPLVRRQ ELLVNSGLAE RLIDVCVENA
501: EEFLQSKFGN EVMYEVAIGG SDGILCPSLS EKLCELYEAI SSVAAEPKPQ ESEKDSEHIL ENFHSSRTIR RLVLNRPGFA SILFKKALSG KCRSWAQGHC
601: SKILSAFVET EDVQVREMAK TELQVLVNEG TLKISATKKP E

Arabidopsis Description

APUM24Pumilio homolog 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.