Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88602 | Soybean | nucleus | 32.5 | 31.71 |
| KRH65810 | Soybean | nucleus | 30.0 | 29.27 |
| Zm00001d034750_P004 | Maize | nucleus | 90.0 | 15.58 |
| EER90567 | Sorghum | cytosol | 76.67 | 14.11 |
| TraesCS4B01G020400.1 | Wheat | nucleus | 43.33 | 10.79 |
| Os03t0831100-01 | Rice | nucleus | 57.5 | 10.47 |
| GSMUA_Achr1P26590_001 | Banana | nucleus | 45.0 | 9.46 |
| TraesCS4A01G364800.1 | Wheat | nucleus | 48.33 | 8.87 |
| HORVU5Hr1G070120.8 | Barley | cytosol, nucleus, plasma membrane | 50.0 | 8.78 |
| TraesCS5D01G508700.1 | Wheat | nucleus | 47.5 | 8.72 |
| TraesCS5B01G508700.1 | Wheat | cytosol | 46.67 | 8.54 |
| HORVU5Hr1G116320.7 | Barley | cytosol, nucleus | 46.67 | 8.35 |
| GSMUA_Achr1P26570_001 | Banana | nucleus | 46.67 | 8.25 |
| AT3G16810.1 | Thale cress | nucleus | 38.33 | 7.18 |
| VIT_05s0077g01770.t01 | Wine grape | plastid | 37.5 | 6.8 |
| CDX95901 | Canola | nucleus | 36.67 | 6.74 |
| Solyc01g065580.2.1 | Tomato | nucleus | 34.17 | 6.61 |
| PGSC0003DMT400003012 | Potato | nucleus | 34.17 | 6.61 |
| KRH02300 | Soybean | nucleus | 35.0 | 6.59 |
| Bra022180.1-P | Field mustard | nucleus | 34.17 | 6.38 |
| KRH50793 | Soybean | endoplasmic reticulum | 33.33 | 6.31 |
| CDX92099 | Canola | nucleus | 32.5 | 6.07 |
| TraesCS5D01G508600.2 | Wheat | cytosol, nucleus, plasma membrane | 35.83 | 5.76 |
| TraesCS4A01G364900.3 | Wheat | nucleus | 34.17 | 5.3 |
| TraesCS5D01G508500.3 | Wheat | nucleus | 33.33 | 5.22 |
| TraesCS5B01G508600.1 | Wheat | nucleus | 33.33 | 5.19 |
| TraesCS6D01G249500.1 | Wheat | plastid | 25.0 | 4.05 |
| HORVU5Hr1G116000.1 | Barley | cytosol, plastid, vacuole | 1.67 | 1.22 |
| GSMUA_Achr1P26600_001 | Banana | extracellular | 1.67 | 0.94 |
| HORVU5Hr1G115980.56 | Barley | endoplasmic reticulum | 0.83 | 0.2 |
| CDY34785 | Canola | extracellular | 0.0 | 0.0 |
| CDY04809 | Canola | nucleus | 0.0 | 0.0 |
| CDX94564 | Canola | nucleus | 0.0 | 0.0 |
| Bra036641.1-P | Field mustard | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d017902_P001 | EnsemblPlants:Zm00001d017902_T001 | EnsemblPlantsGene:Zm00001d017902 | PANTHER:PTHR13389 | ProteinID:AQK74485.1 | SEG:seg |
| UniParc:UPI0008431BEA | UniProt:A0A1D6HJ20 | MapMan:35.2 | : | : | : |
Description
Pumilio homolog 24
Coordinates
chr5:-:209822875..209823935
Molecular Weight (calculated)
13058.0 Da
IEP (calculated)
11.235
GRAVY (calculated)
-0.901
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVGGLQGAK KRKREHAEGK AKPRKQVKGG GDGAKRKSHS AAGGYTAHGG AGEIVARKKT LVTPKEKRLA AKELTKLWEK MRCRNVSKEE RSKAVSQAIH
101: KMDGKYLDIA TSHVTTRVLQ
101: KMDGKYLDIA TSHVTTRVLQ
001: MSSKGLKPQK STKRKDTDSS AKFDSLKSKK PKLVSGEQQQ HVKPKFGKPK SAGDKEQSTN LSKKERRVQA KELTEARKKK RKPHYNLEQE LVSLWEKMRR
101: RNIGKEDRSK LISEAIRKMK GKVPEIAVSH VSSRVLQTCV KFCSQAEKDV LFTELQPQFL NLASNKYAVH FIQKMLDGAS KQQLAACISS LRGHVAPLLR
201: HVFGSLVVEH AYHLGSAAQK QELLAELYST ELQLFKGLTT SNEKTVVDII AKLGLQKGAV NRHMTAIIQP ILEKGIVDHT ITHKLLIEYL TIADKTSAAD
301: VLQLLTGSLL LRMVHTRDGS RLAMLSIKHG SAKERKKIIK AMKEHVKKMA FDQFGSMVLA CIFSIVDDTK LVTKIIVREL EATLKDLVMD KNGRRPLLQL
401: LHPNSSRYLS HDDLAALDLS VPSLCSMDKS ETSSKTKDTD GNEIGEETKD EQEDTVAEHS DHEENVTAMG GKKDPLVRRQ ELLVNSGLAE RLIDVCVENA
501: EEFLQSKFGN EVMYEVAIGG SDGILCPSLS EKLCELYEAI SSVAAEPKPQ ESEKDSEHIL ENFHSSRTIR RLVLNRPGFA SILFKKALSG KCRSWAQGHC
601: SKILSAFVET EDVQVREMAK TELQVLVNEG TLKISATKKP E
101: RNIGKEDRSK LISEAIRKMK GKVPEIAVSH VSSRVLQTCV KFCSQAEKDV LFTELQPQFL NLASNKYAVH FIQKMLDGAS KQQLAACISS LRGHVAPLLR
201: HVFGSLVVEH AYHLGSAAQK QELLAELYST ELQLFKGLTT SNEKTVVDII AKLGLQKGAV NRHMTAIIQP ILEKGIVDHT ITHKLLIEYL TIADKTSAAD
301: VLQLLTGSLL LRMVHTRDGS RLAMLSIKHG SAKERKKIIK AMKEHVKKMA FDQFGSMVLA CIFSIVDDTK LVTKIIVREL EATLKDLVMD KNGRRPLLQL
401: LHPNSSRYLS HDDLAALDLS VPSLCSMDKS ETSSKTKDTD GNEIGEETKD EQEDTVAEHS DHEENVTAMG GKKDPLVRRQ ELLVNSGLAE RLIDVCVENA
501: EEFLQSKFGN EVMYEVAIGG SDGILCPSLS EKLCELYEAI SSVAAEPKPQ ESEKDSEHIL ENFHSSRTIR RLVLNRPGFA SILFKKALSG KCRSWAQGHC
601: SKILSAFVET EDVQVREMAK TELQVLVNEG TLKISATKKP E
Arabidopsis Description
APUM24Pumilio homolog 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.