Subcellular Localization
min:
: max
Winner_takes_all: plastid, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P26600_001 | Banana | extracellular | 38.41 | 29.72 |
| CDY04809 | Canola | nucleus | 31.71 | 26.13 |
| CDX94564 | Canola | nucleus | 30.49 | 25.13 |
| HORVU5Hr1G115980.56 | Barley | endoplasmic reticulum | 67.07 | 21.7 |
| Bra036641.1-P | Field mustard | nucleus | 13.41 | 18.64 |
| CDY34785 | Canola | extracellular | 14.02 | 16.91 |
| HORVU5Hr1G116320.7 | Barley | cytosol, nucleus | 67.68 | 16.54 |
| HORVU5Hr1G070120.8 | Barley | cytosol, nucleus, plasma membrane | 67.07 | 16.11 |
| Os03t0831100-01 | Rice | nucleus | 60.98 | 15.17 |
| EER90567 | Sorghum | cytosol | 53.05 | 13.34 |
| Zm00001d034750_P004 | Maize | nucleus | 53.05 | 12.55 |
| KRH02300 | Soybean | nucleus | 45.12 | 11.62 |
| KRH50793 | Soybean | endoplasmic reticulum | 44.51 | 11.51 |
| VIT_05s0077g01770.t01 | Wine grape | plastid | 43.29 | 10.73 |
| GSMUA_Achr1P26570_001 | Banana | nucleus | 43.9 | 10.6 |
| CDX92099 | Canola | nucleus | 37.8 | 9.64 |
| PGSC0003DMT400003012 | Potato | nucleus | 35.98 | 9.52 |
| Solyc01g065580.2.1 | Tomato | nucleus | 35.98 | 9.52 |
| Bra022180.1-P | Field mustard | nucleus | 37.2 | 9.49 |
| CDX95901 | Canola | nucleus | 36.59 | 9.19 |
| AT3G16810.1 | Thale cress | nucleus | 34.76 | 8.89 |
| HORVU5Hr1G116330.1 | Barley | cytosol | 4.27 | 6.73 |
| KRH65810 | Soybean | nucleus | 3.05 | 4.07 |
| KRG88602 | Soybean | nucleus | 2.44 | 3.25 |
| GSMUA_Achr1P26590_001 | Banana | nucleus | 9.76 | 2.8 |
| Zm00001d017902_P001 | Maize | nucleus | 1.22 | 1.67 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G116000.1 | EnsemblPlantsGene:HORVU5Hr1G116000 | PANTHER:PTHR13389 | UniParc:UPI000B4890E0 | UniProt:A0A287SUW7 | MapMan:17.1.1.9.3 |
Description
No Description!
Coordinates
chrchr5H:+:647465270..647466871
Molecular Weight (calculated)
18456.2 Da
IEP (calculated)
7.149
GRAVY (calculated)
-0.246
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLNTNEEST IEEHHDCTYF CFIRGVLLLC LWRFCIAISK VAVGGKNNFL EGVTDRIHVL HNAIASDASR PRTDDGDEHA FDNYHSSRII RRMILDCPAF
101: AAILWKKALK GKCKLYADGF SSMVVAAYLE SPDSRMKDLA KSKLQPLIDG GILKPQDHKA EDEK
101: AAILWKKALK GKCKLYADGF SSMVVAAYLE SPDSRMKDLA KSKLQPLIDG GILKPQDHKA EDEK
001: MSSKGLKPQK STKRKDTDSS AKFDSLKSKK PKLVSGEQQQ HVKPKFGKPK SAGDKEQSTN LSKKERRVQA KELTEARKKK RKPHYNLEQE LVSLWEKMRR
101: RNIGKEDRSK LISEAIRKMK GKVPEIAVSH VSSRVLQTCV KFCSQAEKDV LFTELQPQFL NLASNKYAVH FIQKMLDGAS KQQLAACISS LRGHVAPLLR
201: HVFGSLVVEH AYHLGSAAQK QELLAELYST ELQLFKGLTT SNEKTVVDII AKLGLQKGAV NRHMTAIIQP ILEKGIVDHT ITHKLLIEYL TIADKTSAAD
301: VLQLLTGSLL LRMVHTRDGS RLAMLSIKHG SAKERKKIIK AMKEHVKKMA FDQFGSMVLA CIFSIVDDTK LVTKIIVREL EATLKDLVMD KNGRRPLLQL
401: LHPNSSRYLS HDDLAALDLS VPSLCSMDKS ETSSKTKDTD GNEIGEETKD EQEDTVAEHS DHEENVTAMG GKKDPLVRRQ ELLVNSGLAE RLIDVCVENA
501: EEFLQSKFGN EVMYEVAIGG SDGILCPSLS EKLCELYEAI SSVAAEPKPQ ESEKDSEHIL ENFHSSRTIR RLVLNRPGFA SILFKKALSG KCRSWAQGHC
601: SKILSAFVET EDVQVREMAK TELQVLVNEG TLKISATKKP E
101: RNIGKEDRSK LISEAIRKMK GKVPEIAVSH VSSRVLQTCV KFCSQAEKDV LFTELQPQFL NLASNKYAVH FIQKMLDGAS KQQLAACISS LRGHVAPLLR
201: HVFGSLVVEH AYHLGSAAQK QELLAELYST ELQLFKGLTT SNEKTVVDII AKLGLQKGAV NRHMTAIIQP ILEKGIVDHT ITHKLLIEYL TIADKTSAAD
301: VLQLLTGSLL LRMVHTRDGS RLAMLSIKHG SAKERKKIIK AMKEHVKKMA FDQFGSMVLA CIFSIVDDTK LVTKIIVREL EATLKDLVMD KNGRRPLLQL
401: LHPNSSRYLS HDDLAALDLS VPSLCSMDKS ETSSKTKDTD GNEIGEETKD EQEDTVAEHS DHEENVTAMG GKKDPLVRRQ ELLVNSGLAE RLIDVCVENA
501: EEFLQSKFGN EVMYEVAIGG SDGILCPSLS EKLCELYEAI SSVAAEPKPQ ESEKDSEHIL ENFHSSRTIR RLVLNRPGFA SILFKKALSG KCRSWAQGHC
601: SKILSAFVET EDVQVREMAK TELQVLVNEG TLKISATKKP E
Arabidopsis Description
APUM24Pumilio homolog 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.