CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88602	Soybean	nucleus	81.3	81.3
Zm00001d017902_P001	Maize	nucleus	29.27	30.0
KRH44120	Soybean	mitochondrion	17.07	16.94
KRH02300	Soybean	nucleus	80.49	15.54
KRH50793	Soybean	endoplasmic reticulum	70.73	13.72
TraesCS4B01G020400.1	Wheat	nucleus	40.65	10.37
VIT_05s0077g01770.t01	Wine grape	plastid	52.03	9.67
Solyc01g065580.2.1	Tomato	nucleus	47.97	9.52
PGSC0003DMT400003012	Potato	nucleus	47.97	9.52
GSMUA_Achr1P26590_001	Banana	nucleus	42.28	9.11
Bra022180.1-P	Field mustard	nucleus	45.53	8.71
AT3G16810.1	Thale cress	nucleus	43.9	8.42
TraesCS4A01G364800.1	Wheat	nucleus	44.72	8.41
CDX92099	Canola	nucleus	43.9	8.4
TraesCS5B01G508700.1	Wheat	cytosol	44.72	8.38
CDX95901	Canola	nucleus	43.9	8.27
TraesCS5D01G508700.1	Wheat	nucleus	43.9	8.26
Os03t0831100-01	Rice	nucleus	43.09	8.04
HORVU5Hr1G070120.8	Barley	cytosol, nucleus, plasma membrane	43.09	7.76
EER90567	Sorghum	cytosol	40.65	7.67
GSMUA_Achr1P26570_001	Banana	nucleus	42.28	7.66
HORVU5Hr1G116320.7	Barley	cytosol, nucleus	40.65	7.45
Zm00001d034750_P004	Maize	nucleus	36.59	6.49
TraesCS5D01G508600.2	Wheat	cytosol, nucleus, plasma membrane	30.89	5.09
TraesCS5D01G508500.3	Wheat	nucleus	30.08	4.83
TraesCS4A01G364900.3	Wheat	nucleus	30.08	4.78
TraesCS5B01G508600.1	Wheat	nucleus	27.64	4.41
TraesCS6D01G249500.1	Wheat	plastid	20.33	3.38
HORVU5Hr1G116000.1	Barley	cytosol, plastid, vacuole	4.07	3.05
GSMUA_Achr1P26600_001	Banana	extracellular	0.81	0.47
HORVU5Hr1G115980.56	Barley	endoplasmic reticulum	1.63	0.39
CDY04809	Canola	nucleus	0.0	0.0
CDY34785	Canola	extracellular	0.0	0.0
CDX94564	Canola	nucleus	0.0	0.0
Bra036641.1-P	Field mustard	nucleus	0.0	0.0

Protein Annotations

MapMan:35.1	EMBL:ACUP02001581	EnsemblPlantsGene:GLYMA_03G063100	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003729	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0006412	GO:GO:0006417	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	UniProt:K7KD89	EnsemblPlants:KRH65810	ProteinID:KRH65810	ProteinID:KRH65810.1
PANTHER:PTHR13389	UniParc:UPI000295193C	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:9792988..9793761

Molecular Weight (calculated)

14383.7 Da

IEP (calculated)

11.379

GRAVY (calculated)

-1.402

Length

123 amino acids

Sequence
(BLAST)

001: MAAKKHDVGD TKKRKRLNTK TQKDPKASKL VASKKHKLDS VAKDNKNKKT TPLTGQERRL HSKELADARK KKRKRHFTLE QELARLWEKM RRHEIAKEDR
101: AKLVTEALQK MKGKIPEIAK RNV

Best Arabidopsis Sequence Match ( AT3G16810.1 )
(BLAST)

001: MSSKGLKPQK STKRKDTDSS AKFDSLKSKK PKLVSGEQQQ HVKPKFGKPK SAGDKEQSTN LSKKERRVQA KELTEARKKK RKPHYNLEQE LVSLWEKMRR
101: RNIGKEDRSK LISEAIRKMK GKVPEIAVSH VSSRVLQTCV KFCSQAEKDV LFTELQPQFL NLASNKYAVH FIQKMLDGAS KQQLAACISS LRGHVAPLLR
201: HVFGSLVVEH AYHLGSAAQK QELLAELYST ELQLFKGLTT SNEKTVVDII AKLGLQKGAV NRHMTAIIQP ILEKGIVDHT ITHKLLIEYL TIADKTSAAD
301: VLQLLTGSLL LRMVHTRDGS RLAMLSIKHG SAKERKKIIK AMKEHVKKMA FDQFGSMVLA CIFSIVDDTK LVTKIIVREL EATLKDLVMD KNGRRPLLQL
401: LHPNSSRYLS HDDLAALDLS VPSLCSMDKS ETSSKTKDTD GNEIGEETKD EQEDTVAEHS DHEENVTAMG GKKDPLVRRQ ELLVNSGLAE RLIDVCVENA
501: EEFLQSKFGN EVMYEVAIGG SDGILCPSLS EKLCELYEAI SSVAAEPKPQ ESEKDSEHIL ENFHSSRTIR RLVLNRPGFA SILFKKALSG KCRSWAQGHC
601: SKILSAFVET EDVQVREMAK TELQVLVNEG TLKISATKKP E

Arabidopsis Description

APUM24Pumilio homolog 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.