CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43841	Canola	mitochondrion	83.79	84.96
CDY46788	Canola	golgi	77.2	78.71
CDY43054	Canola	mitochondrion	85.99	74.52
Bra003016.1-P	Field mustard	cytosol	83.52	73.25
PGSC0003DMT400069221	Potato	cytosol	61.54	73.2
CDX89237	Canola	mitochondrion	75.82	69.87
CDY19053	Canola	mitochondrion	76.1	69.6
GSMUA_AchrUn_...	Banana	cytosol	55.22	67.0
HORVU0Hr1G021000.1	Barley	plastid	42.58	65.68
AT5G54100.1	Thale cress	mitochondrion	70.05	63.59
CDY28794	Canola	plastid	70.05	63.12
KRH64272	Soybean	mitochondrion	68.96	62.13
KRH53657	Soybean	mitochondrion	68.41	61.63
CDY41775	Canola	plastid	63.19	60.85
VIT_09s0002g01630.t01	Wine grape	mitochondrion	68.41	59.29
HORVU6Hr1G021720.1	Barley	mitochondrion	39.01	57.26
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	56.87	56.56
TraesCS7D01G295000.1	Wheat	mitochondrion	56.59	56.28
TraesCS7A01G299700.1	Wheat	mitochondrion, plastid	56.32	56.01
PGSC0003DMT400001564	Potato	mitochondrion	64.29	55.19
Solyc03g080050.2.1	Tomato	plastid	64.01	54.95
TraesCS4A01G000200.1	Wheat	mitochondrion	53.3	54.65
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	59.62	54.52
CDY41774	Canola	mitochondrion	78.85	54.36
Os08t0158500-02	Rice	mitochondrion	56.04	54.11
TraesCS4B01G000200.1	Wheat	mitochondrion	53.3	53.59
TraesCS4D01G000200.3	Wheat	mitochondrion	54.12	52.81
TraesCS5B01G556400.1	Wheat	mitochondrion	53.57	52.56
HORVU4Hr1G000580.1	Barley	plasma membrane	54.4	52.52
TraesCS5D01G552400.1	Wheat	mitochondrion	54.12	52.39
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	62.91	52.05
Zm00001d024540_P001	Maize	mitochondrion	55.77	51.52
EES13390	Sorghum	mitochondrion	55.49	51.01
TraesCS4A01G322100.1	Wheat	mitochondrion	50.27	50.97
CDY28795	Canola	mitochondrion	72.25	49.16
Zm00001d049533_P001	Maize	plastid	53.57	48.87
TraesCS1B01G457000.1	Wheat	mitochondrion	38.74	41.59
HORVU7Hr1G088720.8	Barley	extracellular, golgi	22.8	36.09
TraesCS1B01G458900.2	Wheat	mitochondrion	22.8	33.74
TraesCS1B01G457600.1	Wheat	mitochondrion	22.8	33.74
Os08t0161100-00	Rice	cytosol	20.33	33.48
HORVU1Hr1G049770.3	Barley	plastid	13.46	23.22
HORVU2Hr1G107420.2	Barley	plastid	11.81	21.18

Protein Annotations

EnsemblPlants:CDY14335	EnsemblPlantsGene:GSBRNA2T00078950001	Gene3D:3.30.479.30	GO:A0A078FIR4	GO:GO:0005575	GO:GO:0016020
InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C	InterPro:Stomatin_fam	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10
PFAM:PF01145	PFAM:PF16200	PRINTS:PR00721	ProteinID:CDY14335	ProteinID:CDY14335.1	SEG:seg
SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI0004EE433C	UniProt:A0A078FIR4	MapMan:35.2	:

Description

BnaA10g07200DBnaA10g07200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FIR4]

Coordinates

chrLK032042:+:150480..152925

Molecular Weight (calculated)

39715.8 Da

IEP (calculated)

9.185

GRAVY (calculated)

-0.181

Length

364 amino acids

Sequence
(BLAST)

001: MNQIIHSRSV ATTALRSISY LRQSSALFHS LPGATATTTP VRHFSSPGHA FNSYQIKPPT NWGIRIVPEK KACVIERFGK YVKTLDSGIH FLVPGVDRIA
101: YVHSLKEEAI PIGNQTAITK DNVSIHIDGV LYVKIVNPHL ASYGVENPIY AVMQLAQTTM RSELGKITLD KTFEERDTLN EKIVEAINVA AKDWGLECLR
201: YEIRDIMPPN GVRVAMEMQA EAERRKRAQI LESEGERQAH INIADGKKSS VILESEAAKI NQVNRASGEA EAIIARAQAT ARGLTMLSQS LNETGGVEAA
301: SMRIAEQYIQ AFGNIAKEST TMLLPSSAAN PANMIAQALT MYKSLVPNGG IQETSAVVSS SKAK

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.