CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19053	Canola	mitochondrion	99.24	98.49
AT4G27585.1	Thale cress	mitochondrion	86.33	82.97
PGSC0003DMT400069221	Potato	cytosol	59.75	77.12
CDY43841	Canola	mitochondrion	69.62	76.6
CDY14335	Canola	plastid	69.87	75.82
GSMUA_AchrUn_...	Banana	cytosol	51.9	68.33
KRH64272	Soybean	mitochondrion	69.87	68.32
KRH53657	Soybean	mitochondrion	69.62	68.07
CDY43054	Canola	mitochondrion	71.65	67.38
CDY46788	Canola	golgi	60.25	66.67
HORVU0Hr1G021000.1	Barley	plastid	39.24	65.68
VIT_09s0002g01630.t01	Wine grape	mitochondrion	68.1	64.05
CDY28794	Canola	plastid	65.06	63.61
Solyc03g080050.2.1	Tomato	plastid	67.85	63.21
PGSC0003DMT400001564	Potato	mitochondrion	67.34	62.74
TraesCS7A01G299700.1	Wheat	mitochondrion, plastid	56.71	61.2
TraesCS7D01G295000.1	Wheat	mitochondrion	56.71	61.2
CDY41775	Canola	plastid	58.23	60.85
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	55.7	60.11
Os08t0158500-02	Rice	mitochondrion	57.22	59.95
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	58.73	58.29
HORVU6Hr1G021720.1	Barley	mitochondrion	36.46	58.06
TraesCS4A01G000200.1	Wheat	mitochondrion	51.9	57.75
TraesCS4B01G000200.1	Wheat	mitochondrion	51.9	56.63
EES13390	Sorghum	mitochondrion	56.71	56.57
Zm00001d024540_P001	Maize	mitochondrion	56.2	56.35
TraesCS5B01G556400.1	Wheat	mitochondrion	51.9	55.26
TraesCS4D01G000200.3	Wheat	mitochondrion	52.15	55.23
HORVU4Hr1G000580.1	Barley	plasma membrane	52.41	54.91
TraesCS5D01G552400.1	Wheat	mitochondrion	51.9	54.52
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	60.0	53.86
TraesCS4A01G322100.1	Wheat	mitochondrion	47.85	52.65
Zm00001d049533_P001	Maize	plastid	52.91	52.38
CDY41774	Canola	mitochondrion	69.11	51.7
CDY28795	Canola	mitochondrion	66.84	49.35
TraesCS1B01G457000.1	Wheat	mitochondrion	37.97	44.25
HORVU7Hr1G088720.8	Barley	extracellular, golgi	22.28	38.26
TraesCS1B01G458900.2	Wheat	mitochondrion	22.28	35.77
TraesCS1B01G457600.1	Wheat	mitochondrion	22.28	35.77
Os08t0161100-00	Rice	cytosol	18.99	33.94
HORVU1Hr1G049770.3	Barley	plastid	11.65	21.8
HORVU2Hr1G107420.2	Barley	plastid	10.13	19.7

Protein Annotations

EnsemblPlants:CDX89237	EnsemblPlantsGene:GSBRNA2T00149432001	Gene3D:3.30.479.30	GO:A0A078DJZ3	GO:GO:0005575	GO:GO:0016020
InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C	InterPro:Stomatin_fam	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10
PFAM:PF01145	PFAM:PF16200	PRINTS:PR00721	ProteinID:CDX89237	ProteinID:CDX89237.1	SEG:seg
SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI0004EF2A97	MapMan:35.2	:	:

Description

BnaA01g16560D

Coordinates

chrLK031858:+:375673..378447

Molecular Weight (calculated)

43281.6 Da

IEP (calculated)

6.737

GRAVY (calculated)

-0.332

Length

395 amino acids

Sequence
(BLAST)

001: MNHLLRKSSA TAMRSVGYLR QSSSAVSTVR QFTSAGYPSN SFQLTPPVNW GVRIVPEKKA FVIERFGKFA KTLPSGIHFL IPFVDRIAYV HSLKEEAIPI
101: PNQTAITKDN VSIHIDGVLY VKIVDPKLAS YGVESPIYAV VQLAQTTMRS ELGKITLDKT FEERDTLNEK IVEAINVAAR DWGLQCLRYE IRDIMPPHGV
201: RVAMEMQAEA ERKKRAQILE SEGERQAHIN IADGKKSSVI LASEAAKMDQ VNRAQGEAEA ILARAEATAR GLAMLSQSLK ETGGVEAASL RVAEQYIQAF
301: SNIAKEGTTM LLPSTASNPA SMIAQALTMY KSLVNQGPKS EHQETSAMEG DWEDIGEKEI SEGSKNQSGS TTFETEKPGH TGGPVFSLQS RTEEP

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.