Factsheet for HORVU0Hr1G021000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G021720.1	Barley	mitochondrion	62.29	59.27
Solyc02g088360.1.1	Tomato	cytosol	31.36	55.22
VIT_04s0023g01410.t01	Wine grape	mitochondrion	15.25	53.73
GSMUA_AchrUn_...	Banana	cytosol	67.8	53.33
PGSC0003DMT400069221	Potato	cytosol	58.9	45.42
CDY14335	Canola	plastid	65.68	42.58
HORVU4Hr1G000580.1	Barley	plasma membrane	67.37	42.18
Bra029043.1-P	Field mustard	mitochondrion	63.56	41.55
CDY43841	Canola	mitochondrion	63.14	41.5
EES13390	Sorghum	mitochondrion	68.64	40.91
Zm00001d024540_P001	Maize	mitochondrion	66.53	39.85
Bra022695.1-P	Field mustard	mitochondrion	61.44	39.84
KRH64272	Soybean	mitochondrion	67.37	39.36
Zm00001d049533_P001	Maize	plastid	66.53	39.35
CDX89237	Canola	mitochondrion	65.68	39.24
KRH53657	Soybean	mitochondrion	66.95	39.11
CDY19053	Canola	mitochondrion	65.25	38.69
AT5G54100.1	Thale cress	mitochondrion	65.25	38.4
HORVU7Hr1G088720.8	Barley	extracellular, golgi	37.29	38.26
Os08t0161100-00	Rice	cytosol	35.59	38.01
AT4G27585.1	Thale cress	mitochondrion	65.25	37.47
PGSC0003DMT400001564	Potato	mitochondrion	66.95	37.26
Solyc03g080050.2.1	Tomato	plastid	66.95	37.26
CDY43054	Canola	mitochondrion	64.41	36.19
Bra003016.1-P	Field mustard	cytosol	63.56	36.14
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	67.37	36.14
CDY46788	Canola	golgi	54.24	35.85
CDY28794	Canola	plastid	60.17	35.15
Bra022696.1-P	Field mustard	plastid	60.17	35.15
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	57.2	33.92
CDY41775	Canola	plastid	52.12	32.54
CDY28795	Canola	mitochondrion	59.32	26.17
CDY41774	Canola	mitochondrion	58.47	26.14
HORVU1Hr1G049770.3	Barley	plastid	22.88	25.59
HORVU2Hr1G107420.2	Barley	plastid	20.34	23.65

Protein Annotations

EnsemblPlants:HORVU0Hr1G021000.1	EnsemblPlantsGene:HORVU0Hr1G021000	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020	InterPro:Band_7
InterPro:Band_7/SPFH_dom_sf	InterPro:Stomatin_fam	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10	PFAM:PF01145	PRINTS:PR00721
SEG:seg	SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI000B47F3DA	UniProt:A0A287E6H1	MapMan:35.2

Description

No Description!

Coordinates

chrchrUn:-:110165703..110169370

Molecular Weight (calculated)

26090.3 Da

IEP (calculated)

7.437

GRAVY (calculated)

-0.214

Length

236 amino acids

Sequence
(BLAST)

001: WRLSSADPPP PRGSFSSFPA SSAPPAPCPA TTPVTRFHVS PCGIRFDALS TPVNWGVSIV PEKKAFVIER FGKYLKTLDS GIHGLVPLVD RIAYVHSLKE
101: EAIPIPDQSA ITKDNVVIQI DGVLYVKIVD PYRASYGVEN PIFAVIQLAQ TTMRSELGKI TLDKTFEERD TLNEKIVRSI NEAATDWGLK CLRYEIRDIS
201: PPSGVKNAME MQAEAERRKR AQILQSEGDD VVRTGI

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.