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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY28794 Canola plastid 95.5 89.36
CDY43841 Canola mitochondrion 63.49 66.85
CDY14335 Canola plastid 60.85 63.19
PGSC0003DMT400069221 Potato cytosol 50.0 61.76
CDY43054 Canola mitochondrion 67.46 60.71
CDY46788 Canola golgi 55.56 58.82
CDX89237 Canola mitochondrion 60.85 58.23
CDY19053 Canola mitochondrion 60.85 57.79
AT5G54100.1 Thale cress mitochondrion 61.11 57.61
GSMUA_AchrUn_... Banana cytosol 45.5 57.33
KRH64272 Soybean mitochondrion 56.61 52.97
KRH53657 Soybean mitochondrion 56.08 52.48
HORVU0Hr1G021000.1 Barley plastid 32.54 52.12
VIT_09s0002g01630.t01 Wine grape mitochondrion 56.88 51.19
CDY41774 Canola mitochondrion 67.46 48.3
PGSC0003DMT400001564 Potato mitochondrion 53.97 48.11
Solyc03g080050.2.1 Tomato plastid 53.97 48.11
Solyc06g073030.1.1 Tomato endoplasmic reticulum, extracellular 49.74 47.24
TraesCS7D01G295000.1 Wheat mitochondrion 45.5 46.99
CDY28795 Canola mitochondrion 66.4 46.92
TraesCS7A01G299700.1 Wheat mitochondrion, plastid 45.24 46.72
TraesCS4A01G000200.1 Wheat mitochondrion 43.65 46.48
TraesCS7B01G187500.1 Wheat golgi, mitochondrion 44.97 46.45
GSMUA_Achr7P04660_001 Banana golgi, mitochondrion 53.97 46.36
Os08t0158500-02 Rice mitochondrion 46.03 46.15
TraesCS4B01G000200.1 Wheat mitochondrion 43.65 45.58
TraesCS5D01G552400.1 Wheat mitochondrion 44.71 44.95
TraesCS4D01G000200.3 Wheat mitochondrion 43.92 44.5
TraesCS5B01G556400.1 Wheat mitochondrion 43.65 44.47
HORVU4Hr1G000580.1 Barley plasma membrane 43.39 43.5
TraesCS4A01G322100.1 Wheat mitochondrion 40.48 42.62
HORVU6Hr1G021720.1 Barley mitochondrion 27.78 42.34
EES13390 Sorghum mitochondrion 44.18 42.17
Zm00001d024540_P001 Maize mitochondrion 43.65 41.88
Zm00001d049533_P001 Maize plastid 43.65 41.35
TraesCS1B01G457000.1 Wheat mitochondrion 34.13 38.05
Os08t0161100-00 Rice cytosol 17.46 29.86
TraesCS1B01G458900.2 Wheat mitochondrion 17.72 27.24
TraesCS1B01G457600.1 Wheat mitochondrion 17.72 27.24
HORVU1Hr1G049770.3 Barley plastid 15.08 27.01
HORVU2Hr1G107420.2 Barley plastid 13.76 25.62
HORVU7Hr1G088720.8 Barley extracellular, golgi 14.81 24.35
Protein Annotations
EnsemblPlants:CDY41775EnsemblPlantsGene:GSBRNA2T00073648001Gene3D:3.30.479.30GO:A0A078HT90GO:GO:0005575GO:GO:0016020
InterPro:Band_7InterPro:Band_7/SPFH_dom_sfInterPro:Band_7_CInterPro:Stomatin_famPANTHER:PTHR43327PANTHER:PTHR43327:SF10
PFAM:PF01145PFAM:PF16200PRINTS:PR00721ProteinID:CDY41775ProteinID:CDY41775.1SMART:SM00244
SUPFAM:SSF117892UniParc:UPI0004EE7217UniProt:A0A078HT90MapMan:35.2::
Description
BnaC02g13810DBnaC02g13810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HT90]
Coordinates
chrLK032506:-:32682..34927
Molecular Weight (calculated)
40679.9 Da
IEP (calculated)
9.556
GRAVY (calculated)
-0.107
Length
378 amino acids
Sequence
(BLAST)
001: MNQLVSSPSF GQAAVRSLNY IRPLYAALPL ISAGLNAASK PATTTVRKFS SSPVPNINRI KSPAAPMTQL SSAASAFVRN FSSNSSASAV LDRFQITPQT
101: NWGVRIVPER KACVVERFGK YVKTLGSGIH FLVPGVDRIA YVHSLKEEAI PIGNQSAITK DNVSINIDGV LYVKIVDPKL ASYGVENPER DTLNEKIVEA
201: INVAAKHWGL ECLRYEIKDI MPPNGVKVAM EMQAEAERRK RAQILESEGT RQAHINIADG KKSSVILESE AAKMDQVNRA SGEAEAILAR AQATARGLTL
301: LSQSIKETGG VEAASLRVAE KYIEAFGNIA KEGTTMLLPS SAENPANMIA QALTMYKSLV PKSALQETLA VESSDVVT
Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)
001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q
Arabidopsis Description
SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.