Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY28794 | Canola | plastid | 95.5 | 89.36 |
CDY43841 | Canola | mitochondrion | 63.49 | 66.85 |
CDY14335 | Canola | plastid | 60.85 | 63.19 |
PGSC0003DMT400069221 | Potato | cytosol | 50.0 | 61.76 |
CDY43054 | Canola | mitochondrion | 67.46 | 60.71 |
CDY46788 | Canola | golgi | 55.56 | 58.82 |
CDX89237 | Canola | mitochondrion | 60.85 | 58.23 |
CDY19053 | Canola | mitochondrion | 60.85 | 57.79 |
AT5G54100.1 | Thale cress | mitochondrion | 61.11 | 57.61 |
GSMUA_AchrUn_... | Banana | cytosol | 45.5 | 57.33 |
KRH64272 | Soybean | mitochondrion | 56.61 | 52.97 |
KRH53657 | Soybean | mitochondrion | 56.08 | 52.48 |
HORVU0Hr1G021000.1 | Barley | plastid | 32.54 | 52.12 |
VIT_09s0002g01630.t01 | Wine grape | mitochondrion | 56.88 | 51.19 |
CDY41774 | Canola | mitochondrion | 67.46 | 48.3 |
PGSC0003DMT400001564 | Potato | mitochondrion | 53.97 | 48.11 |
Solyc03g080050.2.1 | Tomato | plastid | 53.97 | 48.11 |
Solyc06g073030.1.1 | Tomato | endoplasmic reticulum, extracellular | 49.74 | 47.24 |
TraesCS7D01G295000.1 | Wheat | mitochondrion | 45.5 | 46.99 |
CDY28795 | Canola | mitochondrion | 66.4 | 46.92 |
TraesCS7A01G299700.1 | Wheat | mitochondrion, plastid | 45.24 | 46.72 |
TraesCS4A01G000200.1 | Wheat | mitochondrion | 43.65 | 46.48 |
TraesCS7B01G187500.1 | Wheat | golgi, mitochondrion | 44.97 | 46.45 |
GSMUA_Achr7P04660_001 | Banana | golgi, mitochondrion | 53.97 | 46.36 |
Os08t0158500-02 | Rice | mitochondrion | 46.03 | 46.15 |
TraesCS4B01G000200.1 | Wheat | mitochondrion | 43.65 | 45.58 |
TraesCS5D01G552400.1 | Wheat | mitochondrion | 44.71 | 44.95 |
TraesCS4D01G000200.3 | Wheat | mitochondrion | 43.92 | 44.5 |
TraesCS5B01G556400.1 | Wheat | mitochondrion | 43.65 | 44.47 |
HORVU4Hr1G000580.1 | Barley | plasma membrane | 43.39 | 43.5 |
TraesCS4A01G322100.1 | Wheat | mitochondrion | 40.48 | 42.62 |
HORVU6Hr1G021720.1 | Barley | mitochondrion | 27.78 | 42.34 |
EES13390 | Sorghum | mitochondrion | 44.18 | 42.17 |
Zm00001d024540_P001 | Maize | mitochondrion | 43.65 | 41.88 |
Zm00001d049533_P001 | Maize | plastid | 43.65 | 41.35 |
TraesCS1B01G457000.1 | Wheat | mitochondrion | 34.13 | 38.05 |
Os08t0161100-00 | Rice | cytosol | 17.46 | 29.86 |
TraesCS1B01G458900.2 | Wheat | mitochondrion | 17.72 | 27.24 |
TraesCS1B01G457600.1 | Wheat | mitochondrion | 17.72 | 27.24 |
HORVU1Hr1G049770.3 | Barley | plastid | 15.08 | 27.01 |
HORVU2Hr1G107420.2 | Barley | plastid | 13.76 | 25.62 |
HORVU7Hr1G088720.8 | Barley | extracellular, golgi | 14.81 | 24.35 |
Protein Annotations
EnsemblPlants:CDY41775 | EnsemblPlantsGene:GSBRNA2T00073648001 | Gene3D:3.30.479.30 | GO:A0A078HT90 | GO:GO:0005575 | GO:GO:0016020 |
InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf | InterPro:Band_7_C | InterPro:Stomatin_fam | PANTHER:PTHR43327 | PANTHER:PTHR43327:SF10 |
PFAM:PF01145 | PFAM:PF16200 | PRINTS:PR00721 | ProteinID:CDY41775 | ProteinID:CDY41775.1 | SMART:SM00244 |
SUPFAM:SSF117892 | UniParc:UPI0004EE7217 | UniProt:A0A078HT90 | MapMan:35.2 | : | : |
Description
BnaC02g13810DBnaC02g13810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HT90]
Coordinates
chrLK032506:-:32682..34927
Molecular Weight (calculated)
40679.9 Da
IEP (calculated)
9.556
GRAVY (calculated)
-0.107
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQLVSSPSF GQAAVRSLNY IRPLYAALPL ISAGLNAASK PATTTVRKFS SSPVPNINRI KSPAAPMTQL SSAASAFVRN FSSNSSASAV LDRFQITPQT
101: NWGVRIVPER KACVVERFGK YVKTLGSGIH FLVPGVDRIA YVHSLKEEAI PIGNQSAITK DNVSINIDGV LYVKIVDPKL ASYGVENPER DTLNEKIVEA
201: INVAAKHWGL ECLRYEIKDI MPPNGVKVAM EMQAEAERRK RAQILESEGT RQAHINIADG KKSSVILESE AAKMDQVNRA SGEAEAILAR AQATARGLTL
301: LSQSIKETGG VEAASLRVAE KYIEAFGNIA KEGTTMLLPS SAENPANMIA QALTMYKSLV PKSALQETLA VESSDVVT
101: NWGVRIVPER KACVVERFGK YVKTLGSGIH FLVPGVDRIA YVHSLKEEAI PIGNQSAITK DNVSINIDGV LYVKIVDPKL ASYGVENPER DTLNEKIVEA
201: INVAAKHWGL ECLRYEIKDI MPPNGVKVAM EMQAEAERRK RAQILESEGT RQAHINIADG KKSSVILESE AAKMDQVNRA SGEAEAILAR AQATARGLTL
301: LSQSIKETGG VEAASLRVAE KYIEAFGNIA KEGTTMLLPS SAENPANMIA QALTMYKSLV PKSALQETLA VESSDVVT
001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q
Arabidopsis Description
SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.