Factsheet for GSMUA_Achr7P04660_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 2
mitochondrion 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	54.55	80.0
PGSC0003DMT400069221	Potato	cytosol	50.68	72.88
Solyc02g088360.1.1	Tomato	cytosol	20.68	67.91
HORVU0Hr1G021000.1	Barley	plastid	36.14	67.37
CDY43841	Canola	mitochondrion	52.73	64.62
Bra029043.1-P	Field mustard	mitochondrion	51.82	63.16
CDY14335	Canola	plastid	52.05	62.91
TraesCS7A01G299700.1	Wheat	mitochondrion, plastid	52.05	62.57
TraesCS7D01G295000.1	Wheat	mitochondrion	52.05	62.57
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	51.82	62.3
KRH64272	Soybean	mitochondrion	56.82	61.88
TraesCS4A01G000200.1	Wheat	mitochondrion	49.77	61.69
KRH53657	Soybean	mitochondrion	56.36	61.39
TraesCS4B01G000200.1	Wheat	mitochondrion	50.0	60.77
PGSC0003DMT400001564	Potato	mitochondrion	58.41	60.61
Os08t0158500-02	Rice	mitochondrion	51.59	60.21
Bra022695.1-P	Field mustard	mitochondrion	49.77	60.16
Solyc03g080050.2.1	Tomato	plastid	57.95	60.14
CDX89237	Canola	mitochondrion	53.86	60.0
CDY19053	Canola	mitochondrion	54.09	59.8
VIT_04s0023g01410.t01	Wine grape	mitochondrion	9.09	59.7
CDY46788	Canola	golgi	48.41	59.66
TraesCS5B01G556400.1	Wheat	mitochondrion	50.23	59.57
AT5G54100.1	Thale cress	mitochondrion	54.09	59.35
TraesCS5D01G552400.1	Wheat	mitochondrion	50.68	59.31
HORVU6Hr1G021720.1	Barley	mitochondrion	33.41	59.27
AT4G27585.1	Thale cress	mitochondrion	55.23	59.12
TraesCS4D01G000200.3	Wheat	mitochondrion	50.0	58.98
TraesCS4A01G322100.1	Wheat	mitochondrion	47.05	57.66
HORVU4Hr1G000580.1	Barley	plasma membrane	49.32	57.56
CDY28794	Canola	plastid	51.82	56.44
Bra022696.1-P	Field mustard	plastid	51.82	56.44
Bra003016.1-P	Field mustard	cytosol	52.95	56.14
CDY43054	Canola	mitochondrion	52.73	55.24
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	49.77	55.03
Zm00001d024540_P001	Maize	mitochondrion	49.09	54.82
EES13390	Sorghum	mitochondrion	49.32	54.8
CDY41775	Canola	plastid	46.36	53.97
Zm00001d049533_P001	Maize	plastid	48.64	53.63
TraesCS1B01G457000.1	Wheat	mitochondrion	32.5	42.18
CDY41774	Canola	mitochondrion	50.23	41.86
HORVU7Hr1G088720.8	Barley	extracellular, golgi	21.82	41.74
CDY28795	Canola	mitochondrion	50.0	41.12
Os08t0161100-00	Rice	cytosol	18.86	37.56
TraesCS1B01G458900.2	Wheat	mitochondrion	18.64	33.33
TraesCS1B01G457600.1	Wheat	mitochondrion	18.64	33.33
HORVU2Hr1G107420.2	Barley	plastid	12.27	26.6
HORVU1Hr1G049770.3	Barley	plastid	12.73	26.54
GSMUA_AchrUn_...	Banana	cytosol	5.23	20.72

Protein Annotations

EnsemblPlants:GSMUA_Achr7P04660_001	EnsemblPlants:GSMUA_Achr7T04660_001	EnsemblPlantsGene:GSMUA_Achr7G04660_001	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020
InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C	InterPro:Stomatin_fam	ncoils:Coil	PANTHER:PTHR43327
PANTHER:PTHR43327:SF10	PFAM:PF01145	PFAM:PF16200	PRINTS:PR00721	SEG:seg	SMART:SM00244
SUPFAM:SSF117892	UniParc:UPI000296B46D	UniProt:M0TEQ6	MapMan:35.2	:	:

Description

Stomatin-like protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G04660_001]

Coordinates

chr7:+:3506303..3510880

Molecular Weight (calculated)

48359.2 Da

IEP (calculated)

6.949

GRAVY (calculated)

-0.144

Length

440 amino acids

Sequence
(BLAST)

001: MAMMRAKSLH LPLRSSLTAA SSALFFGRAE PVFLFSPPLP LIRHYRGGGR SRDDFPFSRL VNPVLKTLAI NSLLFCFWFL DERSFGDEGS LRYEQPRLPI
101: NWGIRIVSEK KAYIVERFGK YLRTLGSGIH LLVPLVDRIA YVHSLKEEAI PIPDQSAITK DNVSILIDGV LYVKIVDPIL ASYGVENPIF AVIQLAQTTM
201: RSELGKITLD KTFEERDTLN ENIVRAINEA ASDWGLKCLR YEIRDISPPP GVKAAMEMQA EAERRKRAQV LESEGERQAN INIADGKKNS VILASEAAMM
301: DQVNRAKGEA EAILARSQAT ADGLKILSEA MKAEGGAEAA SLRIAEQYIT AFGCIAKEGT TLLLPSSVGN PSSMIAQALA IYKKLNVGNI SSLSLDNPQT
401: ETSDESKTDG DTRINEVRIN ALSDPSERAF SLQSPPKGFS

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.