Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0023g01410.t01 | Wine grape | mitochondrion | 13.12 | 43.28 |
| HORVU0Hr1G021000.1 | Barley | plastid | 38.01 | 35.59 |
| GSMUA_AchrUn_... | Banana | cytosol | 34.39 | 25.33 |
| Os08t0158500-02 | Rice | mitochondrion | 38.91 | 22.81 |
| PGSC0003DMT400069221 | Potato | cytosol | 28.96 | 20.91 |
| Solyc02g088360.1.1 | Tomato | cytosol | 12.67 | 20.9 |
| CDY43841 | Canola | mitochondrion | 33.48 | 20.61 |
| Bra022695.1-P | Field mustard | mitochondrion | 33.94 | 20.6 |
| Bra029043.1-P | Field mustard | mitochondrion | 33.48 | 20.5 |
| CDY14335 | Canola | plastid | 33.48 | 20.33 |
| EES13390 | Sorghum | mitochondrion | 35.29 | 19.7 |
| Solyc03g080050.2.1 | Tomato | plastid | 37.56 | 19.58 |
| Zm00001d024540_P001 | Maize | mitochondrion | 34.84 | 19.54 |
| PGSC0003DMT400001564 | Potato | mitochondrion | 37.1 | 19.34 |
| KRH53657 | Soybean | mitochondrion | 35.29 | 19.31 |
| Zm00001d049533_P001 | Maize | plastid | 34.84 | 19.3 |
| CDY19053 | Canola | mitochondrion | 34.39 | 19.1 |
| KRH64272 | Soybean | mitochondrion | 34.84 | 19.06 |
| CDY46788 | Canola | golgi | 30.77 | 19.05 |
| CDX89237 | Canola | mitochondrion | 33.94 | 18.99 |
| GSMUA_Achr7P04660_001 | Banana | golgi, mitochondrion | 37.56 | 18.86 |
| CDY28794 | Canola | plastid | 34.39 | 18.81 |
| Bra022696.1-P | Field mustard | plastid | 34.39 | 18.81 |
| Bra003016.1-P | Field mustard | cytosol | 35.29 | 18.8 |
| AT4G27585.1 | Thale cress | mitochondrion | 34.84 | 18.73 |
| AT5G54100.1 | Thale cress | mitochondrion | 33.94 | 18.7 |
| CDY43054 | Canola | mitochondrion | 33.48 | 17.62 |
| CDY41775 | Canola | plastid | 29.86 | 17.46 |
| Solyc06g073030.1.1 | Tomato | endoplasmic reticulum, extracellular | 26.24 | 14.57 |
| CDY28795 | Canola | mitochondrion | 33.94 | 14.02 |
| CDY41774 | Canola | mitochondrion | 33.03 | 13.83 |
Protein Annotations
| EnsemblPlants:Os08t0161100-00 | EnsemblPlantsGene:Os08g0161100 | Gene3D:3.30.479.30 | GO:GO:0005575 | GO:GO:0016020 | InterPro:Band_7 |
| InterPro:Band_7/SPFH_dom_sf | InterPro:Stomatin_fam | PANTHER:PTHR43327 | PANTHER:PTHR43327:SF10 | PFAM:PF01145 | PRINTS:PR00721 |
| ProteinID:BAT03934.1 | SEG:seg | SMART:SM00244 | SUPFAM:SSF117892 | UniParc:UPI000393A5EB | UniProt:A0A0P0XC31 |
| MapMan:35.2 | : | : | : | : | : |
Description
Similar to stomatin1. (Os08t0161100-00)
Coordinates
chr8:+:3575826..3577853
Molecular Weight (calculated)
24887.0 Da
IEP (calculated)
9.973
GRAVY (calculated)
-0.421
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: WPHGPHVNVT DGPPSPWVAD PLPRLPEGYK STIPPPRNPL VFSRRRRDHG DAFSSPAILR RPSDPAPRLL PLSQLRHRRR LHPHVRRAEH AAGELWGDHH
101: RAGEEGDRGG ALIGKYHKTL GSGMHVLVPV VDRIAYVHSL KIQAIPIPDQ LAITKDNVVV QIDGVLFFKI VDPYLASYVV DDPNFEATQL ALTTVKSEVE
201: KTLYKIVKER DTLKEQIMVP W
101: RAGEEGDRGG ALIGKYHKTL GSGMHVLVPV VDRIAYVHSL KIQAIPIPDQ LAITKDNVVV QIDGVLFFKI VDPYLASYVV DDPNFEATQL ALTTVKSEVE
201: KTLYKIVKER DTLKEQIMVP W
001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q
Arabidopsis Description
SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.