Factsheet for Solyc02g088360.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G021000.1	Barley	plastid	55.22	31.36
GSMUA_AchrUn_...	Banana	cytosol	67.91	30.33
HORVU6Hr1G021720.1	Barley	mitochondrion	52.99	28.63
HORVU7Hr1G088720.8	Barley	extracellular, golgi	38.81	22.61
Zm00001d024540_P001	Maize	mitochondrion	64.93	22.08
Zm00001d049533_P001	Maize	plastid	64.93	21.8
EES13390	Sorghum	mitochondrion	64.18	21.72
Solyc03g080050.2.1	Tomato	plastid	68.66	21.7
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	63.43	21.36
Os08t0158500-02	Rice	mitochondrion	58.21	20.69
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	67.91	20.68
TraesCS4A01G322100.1	Wheat	mitochondrion	55.22	20.61
TraesCS4A01G000200.1	Wheat	mitochondrion	54.48	20.56
TraesCS7A01G299700.1	Wheat	mitochondrion, plastid	55.97	20.49
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	55.97	20.49
TraesCS7D01G295000.1	Wheat	mitochondrion	55.97	20.49
TraesCS4D01G000200.3	Wheat	mitochondrion	56.72	20.38
TraesCS4B01G000200.1	Wheat	mitochondrion	54.48	20.17
TraesCS5B01G556400.1	Wheat	mitochondrion	55.22	19.95
TraesCS5D01G552400.1	Wheat	mitochondrion	55.22	19.68
HORVU4Hr1G000580.1	Barley	plasma membrane	55.22	19.63
TraesCS1B01G457000.1	Wheat	mitochondrion	40.3	15.93
TraesCS1B01G457600.1	Wheat	mitochondrion	27.61	15.04
TraesCS1B01G458900.2	Wheat	mitochondrion	27.61	15.04
Os08t0161100-00	Rice	cytosol	20.9	12.67
HORVU1Hr1G049770.3	Barley	plastid	8.96	5.69
HORVU2Hr1G107420.2	Barley	plastid	2.24	1.48

Protein Annotations

EnsemblPlants:Solyc02g088360.1.1	EnsemblPlantsGene:Solyc02g088360.1	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020	InterPro:Band_7
InterPro:Band_7/SPFH_dom_sf	InterPro:Stomatin_fam	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10	PFAM:PF01145	PRINTS:PR00721
SUPFAM:SSF117892	UniParc:UPI00027686C2	UniProt:K4BBZ2	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr2:+:50480970..50481374

Molecular Weight (calculated)

15026.1 Da

IEP (calculated)

5.001

GRAVY (calculated)

-0.276

Length

134 amino acids

Sequence
(BLAST)

001: MDGVLYIRIT NPVLASYGAE DPIYAVVQLA QTTTRSELGK ITLDKTFEER IELNRSILNA INYWPLRTDW GLECLRYEIK DITPPEGARV AMELQAEAER
101: KKRAKVLISE GQRQADVNVA DGKKMAVILE TGGC

Best Arabidopsis Sequence Match ( AT5G54100.1 )
(BLAST)

001: MNQLALSRSG YTAAVRFLPM LSAAVPKILS SLAAASTVRN FSSTGSPLTS YQINKPSPSK SFTSRLLHQS SSAGTPPQQL FGARSFSSPS SDFNSYHINP
101: PSNWGIRIVP ERKACVIERF GKFHTTLPAG IHFLVPFVDR IAYVHSLKEE AIPIGNQTAI TKDNVSIHID GVLYVKIVDP KLASYGVENP IYAVMQLAQT
201: TMRSELGKIT LDKTFEERDT LNEKIVEAIN VAAKDWGLQC LRYEIRDIMP PNGVRVAMEM QAEAERKKRA QILESEGERQ AHINRADGKK SSVILESEAA
301: MMDQVNRAQG EAEAILARAQ ATAKGLAMVS QSLKEAGGEE AASLRVAEQY IQAFGKIAKE GTTMLLPSNV DNPASMIAQA LGMYKGLSTK VPTVVSGKLL
401: E

Arabidopsis Description

At5g54100 [Source:UniProtKB/TrEMBL;Acc:Q9LVW0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.