Factsheet for Zm00001d049533_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024540_P001	Maize	mitochondrion	77.69	78.68
EES13390	Sorghum	mitochondrion	77.44	78.03
HORVU0Hr1G021000.1	Barley	plastid	39.35	66.53
Solyc02g088360.1.1	Tomato	cytosol	21.8	64.93
PGSC0003DMT400069221	Potato	cytosol	48.62	63.4
GSMUA_AchrUn_...	Banana	cytosol	46.37	61.67
TraesCS7A01G299700.1	Wheat	mitochondrion, plastid	55.14	60.11
TraesCS7D01G295000.1	Wheat	mitochondrion	55.14	60.11
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	54.89	59.84
Os08t0158500-02	Rice	mitochondrion	56.39	59.68
CDY43841	Canola	mitochondrion	48.62	54.04
Bra029043.1-P	Field mustard	mitochondrion	48.87	54.02
CDY14335	Canola	plastid	48.87	53.57
CDX89237	Canola	mitochondrion	52.38	52.91
KRH64272	Soybean	mitochondrion	53.38	52.72
CDY19053	Canola	mitochondrion	52.38	52.51
KRH53657	Soybean	mitochondrion	53.13	52.48
Bra022695.1-P	Field mustard	mitochondrion	46.12	50.55
AT5G54100.1	Thale cress	mitochondrion	50.38	50.12
AT4G27585.1	Thale cress	mitochondrion	51.38	49.88
Solyc03g080050.2.1	Tomato	plastid	52.63	49.53
PGSC0003DMT400001564	Potato	mitochondrion	52.38	49.29
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	53.63	48.64
CDY46788	Canola	golgi	43.36	48.46
VIT_04s0023g01410.t01	Wine grape	mitochondrion	8.02	47.76
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	47.62	47.74
CDY43054	Canola	mitochondrion	49.62	47.14
Bra003016.1-P	Field mustard	cytosol	48.62	46.75
CDY28794	Canola	plastid	46.87	46.29
Bra022696.1-P	Field mustard	plastid	46.87	46.29
CDY41775	Canola	plastid	41.35	43.65
CDY41774	Canola	mitochondrion	47.12	35.61
CDY28795	Canola	mitochondrion	47.62	35.51
Os08t0161100-00	Rice	cytosol	19.3	34.84

Protein Annotations

EnsemblPlants:Zm00001d049533_P001	EnsemblPlants:Zm00001d049533_T001	EnsemblPlantsGene:Zm00001d049533	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020
InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C	InterPro:Stomatin_fam	ncoils:Coil	PANTHER:PTHR43327
PANTHER:PTHR43327:SF10	PFAM:PF01145	PFAM:PF16200	PRINTS:PR00721	ProteinID:AQK50718.1	SEG:seg
SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI0008446A36	UniProt:A0A1D6PVW8	MapMan:35.2	:

Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family

Coordinates

chr4:+:33612963..33618440

Molecular Weight (calculated)

43554.1 Da

IEP (calculated)

6.196

GRAVY (calculated)

-0.329

Length

399 amino acids

Sequence
(BLAST)

001: MTALCKTLAL PPFSAQPSTP SPHSLLNSAM QSKIDAPGPC AVLRFDPPEP PVNWGMNIVP EKKAFVVERF GKYLKTLDSG FHLLIPAVDR IAYVHSLKEE
101: TIPIPDQNAI TKDNVTIQID SVIYIKIMDP YLASYGVEDP IYAVLQLAQT TMRSELGKIT LDKTFEERDA LNEKIVSAIN EAATDWGLKC IRYEIRDITP
201: PTGIRQAMEM QAEAKRRKRA QILESEGKKQ AQILESEGKK TAQVLESEGA MLDLANRAKG AAEAILAKSE ATARGMRLVS DAMTTEGSAK AASLKLAEQY
301: IEAFSNLAQK TNTMLLPGDS ASPASFVAQA MKTYQQIHSH SQALKYHPQI EGLEESGETS PAAPSSEASK TPPFVGEADS NHTFSLQRPR IRSELPSSA

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.