Factsheet for TraesCS7A01G299700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

plastid: 16595579

msms PMID: 16595579 doi

Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G295000.1	Wheat	mitochondrion	99.18	99.18
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	96.72	96.72
Os08t0158500-02	Rice	mitochondrion	75.96	73.74
TraesCS4A01G000200.1	Wheat	mitochondrion	63.39	65.35
GSMUA_AchrUn_...	Banana	cytosol	51.91	63.33
PGSC0003DMT400069221	Potato	cytosol	52.46	62.75
EES13390	Sorghum	mitochondrion	67.21	62.12
Zm00001d024540_P001	Maize	mitochondrion	66.12	61.42
TraesCS4A01G322100.1	Wheat	mitochondrion	58.74	59.89
CDY43841	Canola	mitochondrion	56.56	57.66
Bra029043.1-P	Field mustard	mitochondrion	56.01	56.79
CDX89237	Canola	mitochondrion	61.2	56.71
CDY14335	Canola	plastid	56.01	56.32
CDY19053	Canola	mitochondrion	60.93	56.03
Solyc02g088360.1.1	Tomato	cytosol	20.49	55.97
Zm00001d049533_P001	Maize	plastid	60.11	55.14
KRH53657	Soybean	mitochondrion	60.66	54.95
KRH64272	Soybean	mitochondrion	60.38	54.7
Bra022695.1-P	Field mustard	mitochondrion	53.55	53.85
VIT_04s0023g01410.t01	Wine grape	mitochondrion	9.84	53.73
AT4G27585.1	Thale cress	mitochondrion	58.74	52.31
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	62.57	52.05
Solyc03g080050.2.1	Tomato	plastid	59.02	50.94
AT5G54100.1	Thale cress	mitochondrion	55.74	50.87
PGSC0003DMT400001564	Potato	mitochondrion	58.74	50.71
CDY46788	Canola	golgi	49.45	50.7
CDY43054	Canola	mitochondrion	56.56	49.29
Bra003016.1-P	Field mustard	cytosol	55.19	48.67
CDY28794	Canola	plastid	53.01	48.02
Bra022696.1-P	Field mustard	plastid	53.01	48.02
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	51.37	47.24
CDY41775	Canola	plastid	46.72	45.24
CDY41774	Canola	mitochondrion	53.55	37.12
CDY28795	Canola	mitochondrion	53.55	36.64

Protein Annotations

EnsemblPlants:TraesCS7A01G299700.1	EnsemblPlantsGene:TraesCS7A01G299700	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020	InterPro:Band_7
InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C	InterPro:Stomatin_fam	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10	PFAM:PF01145
PFAM:PF16200	PRINTS:PR00721	SEG:seg	SMART:SM00244	SUPFAM:SSF117892	TIGR:cd08829
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:411527737..411538020

Molecular Weight (calculated)

40182.1 Da

IEP (calculated)

7.701

GRAVY (calculated)

-0.338

Length

366 amino acids

Sequence
(BLAST)

001: MATLLRRSAA PARHLLLLPR QLGAARSMSR YYARDEVSRF DALSTPVNWG VSIVPEKKAF VIERFGKYLK TLDSGIHGLV PLVDRIAYVH SLKEEAIPIP
101: DQSAITKDNV VIQIDGVLYV KIVDPYRASY GVENPIFAVI QLAQTTMRSE LGKITLDKTF EERDTLNEKI VRSINEASTD WGLKCLRYEI RDISPPPGVK
201: NAMEMQAEAE RRKRAQILQS EGAMLDQANR AKGEAEAILS KSQATAEGIR MVSESMRAEG SAEAAKLRIA EQYITAFAAL AKNTTTMLLP SDAGNPSSMI
301: AQSLQIYKHI SQSSSLKGGN QQAEEVEEAG PQEEGDTFGL PSVTSAMPPS TQTGHGSTFS LQKRKE

Best Arabidopsis Sequence Match ( AT5G54100.1 )
(BLAST)

001: MNQLALSRSG YTAAVRFLPM LSAAVPKILS SLAAASTVRN FSSTGSPLTS YQINKPSPSK SFTSRLLHQS SSAGTPPQQL FGARSFSSPS SDFNSYHINP
101: PSNWGIRIVP ERKACVIERF GKFHTTLPAG IHFLVPFVDR IAYVHSLKEE AIPIGNQTAI TKDNVSIHID GVLYVKIVDP KLASYGVENP IYAVMQLAQT
201: TMRSELGKIT LDKTFEERDT LNEKIVEAIN VAAKDWGLQC LRYEIRDIMP PNGVRVAMEM QAEAERKKRA QILESEGERQ AHINRADGKK SSVILESEAA
301: MMDQVNRAQG EAEAILARAQ ATAKGLAMVS QSLKEAGGEE AASLRVAEQY IQAFGKIAKE GTTMLLPSNV DNPASMIAQA LGMYKGLSTK VPTVVSGKLL
401: E

Arabidopsis Description

At5g54100 [Source:UniProtKB/TrEMBL;Acc:Q9LVW0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.