Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g088360.1.1 | Tomato | cytosol | 30.33 | 67.91 |
| HORVU0Hr1G021000.1 | Barley | plastid | 53.33 | 67.8 |
| PGSC0003DMT400069221 | Potato | cytosol | 64.0 | 62.75 |
| VIT_04s0023g01410.t01 | Wine grape | mitochondrion | 13.33 | 59.7 |
| HORVU6Hr1G021720.1 | Barley | mitochondrion | 48.33 | 58.47 |
| CDY43841 | Canola | mitochondrion | 67.67 | 56.55 |
| Bra029043.1-P | Field mustard | mitochondrion | 67.0 | 55.68 |
| CDY14335 | Canola | plastid | 67.0 | 55.22 |
| GSMUA_Achr7P04660_001 | Banana | golgi, mitochondrion | 80.0 | 54.55 |
| Os08t0158500-02 | Rice | mitochondrion | 65.67 | 52.25 |
| Bra022695.1-P | Field mustard | mitochondrion | 63.33 | 52.2 |
| TraesCS7A01G299700.1 | Wheat | mitochondrion, plastid | 63.33 | 51.91 |
| TraesCS7B01G187500.1 | Wheat | golgi, mitochondrion | 63.33 | 51.91 |
| TraesCS7D01G295000.1 | Wheat | mitochondrion | 63.33 | 51.91 |
| CDX89237 | Canola | mitochondrion | 68.33 | 51.9 |
| TraesCS4A01G000200.1 | Wheat | mitochondrion | 61.0 | 51.55 |
| CDY19053 | Canola | mitochondrion | 68.33 | 51.51 |
| KRH53657 | Soybean | mitochondrion | 69.0 | 51.24 |
| KRH64272 | Soybean | mitochondrion | 68.67 | 50.99 |
| AT5G54100.1 | Thale cress | mitochondrion | 67.67 | 50.62 |
| TraesCS4B01G000200.1 | Wheat | mitochondrion | 61.0 | 50.55 |
| CDY46788 | Canola | golgi | 60.0 | 50.42 |
| AT4G27585.1 | Thale cress | mitochondrion | 69.0 | 50.37 |
| TraesCS4D01G000200.3 | Wheat | mitochondrion | 61.67 | 49.6 |
| PGSC0003DMT400001564 | Potato | mitochondrion | 70.0 | 49.53 |
| Solyc03g080050.2.1 | Tomato | plastid | 70.0 | 49.53 |
| TraesCS4A01G322100.1 | Wheat | mitochondrion | 59.0 | 49.3 |
| CDY43054 | Canola | mitochondrion | 68.33 | 48.81 |
| TraesCS5D01G552400.1 | Wheat | mitochondrion | 61.0 | 48.67 |
| HORVU4Hr1G000580.1 | Barley | plasma membrane | 61.0 | 48.54 |
| TraesCS5B01G556400.1 | Wheat | mitochondrion | 60.0 | 48.52 |
| Bra003016.1-P | Field mustard | cytosol | 66.67 | 48.19 |
| CDY28794 | Canola | plastid | 64.67 | 48.02 |
| Bra022696.1-P | Field mustard | plastid | 64.67 | 48.02 |
| EES13390 | Sorghum | mitochondrion | 62.33 | 47.22 |
| Zm00001d024540_P001 | Maize | mitochondrion | 62.0 | 47.21 |
| Zm00001d049533_P001 | Maize | plastid | 61.67 | 46.37 |
| CDY41775 | Canola | plastid | 57.33 | 45.5 |
| Solyc06g073030.1.1 | Tomato | endoplasmic reticulum, extracellular | 60.33 | 45.48 |
| HORVU7Hr1G088720.8 | Barley | extracellular, golgi | 29.67 | 38.7 |
| TraesCS1B01G457000.1 | Wheat | mitochondrion | 43.0 | 38.05 |
| CDY41774 | Canola | mitochondrion | 63.33 | 35.98 |
| CDY28795 | Canola | mitochondrion | 64.0 | 35.89 |
| Os08t0161100-00 | Rice | cytosol | 25.33 | 34.39 |
| TraesCS1B01G458900.2 | Wheat | mitochondrion | 26.67 | 32.52 |
| TraesCS1B01G457600.1 | Wheat | mitochondrion | 26.67 | 32.52 |
| HORVU1Hr1G049770.3 | Barley | plastid | 16.67 | 23.7 |
| HORVU2Hr1G107420.2 | Barley | plastid | 14.67 | 21.67 |
| GSMUA_AchrUn_... | Banana | cytosol | 6.67 | 18.02 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP02990_001 | EnsemblPlants:GSMUA_AchrUn_randomT02990_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG02990_001 | Gene3D:3.30.479.30 | GO:GO:0005575 | GO:GO:0016020 |
| InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf | InterPro:Stomatin_fam | ncoils:Coil | PANTHER:PTHR43327 | PANTHER:PTHR43327:SF10 |
| PFAM:PF01145 | PRINTS:PR00721 | SEG:seg | SMART:SM00244 | SUPFAM:SSF117892 | UniParc:UPI000296E423 |
| UniProt:M0U5W1 | MapMan:35.2 | : | : | : | : |
Description
Stomatin-like protein 2 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG02990_001]
Coordinates
chrchrUn_random:-:14477667..14493385
Molecular Weight (calculated)
32967.9 Da
IEP (calculated)
7.501
GRAVY (calculated)
-0.137
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSPHRPV VVGDISLAYV DMKAMVRYEQ PPPPINWGIR IVPEKKACVV ERFGKYLRTL GSGIHILVPL VDRIAYVHSL KEEAIPIPDQ SAITKDNVSI
101: LIDGVLYVKI VDPVLASYGV ENPIFAVIQL AQTTMRSELG KITLDKTFEE RDTLNENIVR AINEAASDWG LKCLRYEIRD ISPPPGVKAA MEMQAEAERR
201: KRAQVLESEG ERQAKINIAD GTKASVILAS EAAMMDQVNR AKGEAEAILA RSRATADGLK ILSQAMKAEG GTEARSVPDS SFPSMFICAY HGRTWSFTKA
101: LIDGVLYVKI VDPVLASYGV ENPIFAVIQL AQTTMRSELG KITLDKTFEE RDTLNENIVR AINEAASDWG LKCLRYEIRD ISPPPGVKAA MEMQAEAERR
201: KRAQVLESEG ERQAKINIAD GTKASVILAS EAAMMDQVNR AKGEAEAILA RSRATADGLK ILSQAMKAEG GTEARSVPDS SFPSMFICAY HGRTWSFTKA
001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q
Arabidopsis Description
SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.