Factsheet for HORVU6Hr1G021720.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G021000.1	Barley	plastid	59.27	62.29
Solyc02g088360.1.1	Tomato	cytosol	28.63	52.99
VIT_04s0023g01410.t01	Wine grape	mitochondrion	13.31	49.25
GSMUA_AchrUn_...	Banana	cytosol	58.47	48.33
HORVU4Hr1G000580.1	Barley	plasma membrane	70.16	46.15
PGSC0003DMT400069221	Potato	cytosol	54.03	43.79
HORVU7Hr1G088720.8	Barley	extracellular, golgi	39.92	43.04
Bra029043.1-P	Field mustard	mitochondrion	57.26	39.34
CDY14335	Canola	plastid	57.26	39.01
CDY43841	Canola	mitochondrion	56.45	39.0
CDX89237	Canola	mitochondrion	58.06	36.46
CDY19053	Canola	mitochondrion	58.06	36.18
AT5G54100.1	Thale cress	mitochondrion	57.26	35.41
KRH64272	Soybean	mitochondrion	57.66	35.4
AT4G27585.1	Thale cress	mitochondrion	58.47	35.28
Bra022695.1-P	Field mustard	mitochondrion	51.61	35.16
KRH53657	Soybean	mitochondrion	57.26	35.15
Solyc03g080050.2.1	Tomato	plastid	58.87	34.43
CDY43054	Canola	mitochondrion	58.06	34.29
PGSC0003DMT400001564	Potato	mitochondrion	58.47	34.2
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	59.27	33.41
CDY46788	Canola	golgi	47.98	33.33
Bra003016.1-P	Field mustard	cytosol	55.24	33.01
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	51.21	31.91
Bra022696.1-P	Field mustard	plastid	51.61	31.68
CDY28794	Canola	plastid	51.61	31.68
HORVU1Hr1G049770.3	Barley	plastid	25.81	30.33
CDY41775	Canola	plastid	42.34	27.78
HORVU2Hr1G107420.2	Barley	plastid	22.58	27.59
CDY41774	Canola	mitochondrion	51.61	24.24
CDY28795	Canola	mitochondrion	52.02	24.11

Protein Annotations

EnsemblPlants:HORVU6Hr1G021720.1	EnsemblPlantsGene:HORVU6Hr1G021720	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020	InterPro:Band_7
InterPro:Band_7/SPFH_dom_sf	InterPro:Stomatin_fam	ncoils:Coil	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10	PFAM:PF01145
PRINTS:PR00721	SEG:seg	SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI000B4784F5	UniProt:A0A287TK17
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:67384809..67386866

Molecular Weight (calculated)

27827.7 Da

IEP (calculated)

9.889

GRAVY (calculated)

-0.329

Length

248 amino acids

Sequence
(BLAST)

001: MSTATRMLAR RAVPGHLLHS AATTANPAVA TAALLQRRWY RRGVDPAPSF YDPPPTPANL GLSIVSDKNA FVVERFGKYL KTLPSGIHLL MPGVDRVAYV
101: HSLKEEAIPI PYNSTITKDN VSIQIGGVLY VQIVDPYMAS YGIENPIYVV IQLAQTTMRS ELGKITLDKT FEERDTLNYN IVKSINEAAE TWGLKCLRYE
201: IRDITPPDGV KKAMEMQVAA ERKKRAQILE SEVLKNQRTQ RKEKKQET

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.