Factsheet for HORVU7Hr1G088720.8

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plastid 2
golgi 3
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0023g01410.t01	Wine grape	mitochondrion	13.48	46.27
HORVU6Hr1G021720.1	Barley	mitochondrion	43.04	39.92
Solyc02g088360.1.1	Tomato	cytosol	22.61	38.81
HORVU0Hr1G021000.1	Barley	plastid	38.26	37.29
GSMUA_AchrUn_...	Banana	cytosol	38.7	29.67
PGSC0003DMT400069221	Potato	cytosol	35.65	26.8
HORVU4Hr1G000580.1	Barley	plasma membrane	43.91	26.79
KRH64272	Soybean	mitochondrion	40.87	23.27
CDY46788	Canola	golgi	36.09	23.25
KRH53657	Soybean	mitochondrion	40.43	23.02
CDY43841	Canola	mitochondrion	35.65	22.84
CDY14335	Canola	plastid	36.09	22.8
Bra029043.1-P	Field mustard	mitochondrion	35.65	22.71
CDX89237	Canola	mitochondrion	38.26	22.28
CDY19053	Canola	mitochondrion	38.26	22.11
AT5G54100.1	Thale cress	mitochondrion	38.26	21.95
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	41.74	21.82
PGSC0003DMT400001564	Potato	mitochondrion	40.0	21.7
AT4G27585.1	Thale cress	mitochondrion	38.7	21.65
Solyc03g080050.2.1	Tomato	plastid	39.57	21.46
Bra022695.1-P	Field mustard	mitochondrion	33.48	21.15
CDY43054	Canola	mitochondrion	36.52	20.0
Bra003016.1-P	Field mustard	cytosol	35.65	19.76
Bra022696.1-P	Field mustard	plastid	33.91	19.31
CDY28794	Canola	plastid	33.91	19.31
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	30.43	17.59
CDY41775	Canola	plastid	24.35	14.81
CDY41774	Canola	mitochondrion	33.91	14.77
CDY28795	Canola	mitochondrion	34.35	14.77
HORVU1Hr1G049770.3	Barley	plastid	6.52	7.11
HORVU2Hr1G107420.2	Barley	plastid	3.91	4.43

Protein Annotations

EnsemblPlants:HORVU7Hr1G088720.8	EnsemblPlantsGene:HORVU7Hr1G088720	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020	InterPro:Band_7
InterPro:Band_7/SPFH_dom_sf	InterPro:Stomatin_fam	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10	PFAM:PF01145	PRINTS:PR00721
SEG:seg	SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI000B463594	UniProt:A0A287X8W2	MapMan:35.2

Description

No Description!

Coordinates

chrchr7H:-:538827245..538831758

Molecular Weight (calculated)

26166.2 Da

IEP (calculated)

9.264

GRAVY (calculated)

0.127

Length

230 amino acids

Sequence
(BLAST)

001: MTCFLSLCPG LLMIWTIPLI LRWRRLLPIT CLAKCTYNNL EEAIPIPDNS TITKDNVSIQ IGGVLYVQIV DPYMASYGIE NPIYAVIQLA QTTMKSELVK
101: ITLDKTFEER DTLNYNIVKS INEAAETWGL KCLRYEISML LFLPSFLLQL WGTSLLQMES RRPSRCRPQQ SARNVLRSLS LKVAFTRNFI KGAIRNDHAV
201: AKTKRTSVIS GNGAWEGLSC ALFHSWAWMI

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.