Factsheet for Bra029043.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43054	Canola	mitochondrion	99.72	85.71
Bra022695.1-P	Field mustard	mitochondrion	75.35	74.73
PGSC0003DMT400069221	Potato	cytosol	62.88	74.18
Bra003016.1-P	Field mustard	cytosol	81.99	71.33
GSMUA_AchrUn_...	Banana	cytosol	55.68	67.0
Bra022696.1-P	Field mustard	plastid	72.58	64.85
AT5G54100.1	Thale cress	mitochondrion	71.75	64.59
HORVU0Hr1G021000.1	Barley	plastid	41.55	63.56
KRH53657	Soybean	mitochondrion	70.64	63.12
KRH64272	Soybean	mitochondrion	70.64	63.12
VIT_09s0002g01630.t01	Wine grape	mitochondrion	69.81	60.0
HORVU6Hr1G021720.1	Barley	mitochondrion	39.34	57.26
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	57.34	56.56
TraesCS7D01G295000.1	Wheat	mitochondrion	57.06	56.28
Solyc03g080050.2.1	Tomato	plastid	65.93	56.13
TraesCS7A01G299700.1	Wheat	mitochondrion, plastid	56.79	56.01
PGSC0003DMT400001564	Potato	mitochondrion	65.65	55.9
TraesCS4A01G000200.1	Wheat	mitochondrion	54.57	55.49
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	60.66	55.03
TraesCS4B01G000200.1	Wheat	mitochondrion	54.85	54.7
TraesCS4D01G000200.3	Wheat	mitochondrion	55.96	54.16
Os08t0158500-02	Rice	mitochondrion	56.51	54.11
TraesCS5B01G556400.1	Wheat	mitochondrion	55.4	53.91
TraesCS5D01G552400.1	Wheat	mitochondrion	55.96	53.72
HORVU4Hr1G000580.1	Barley	plasma membrane	55.12	52.79
TraesCS4A01G322100.1	Wheat	mitochondrion	51.8	52.09
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	63.16	51.82
Zm00001d024540_P001	Maize	mitochondrion	56.51	51.78
EES13390	Sorghum	mitochondrion	56.51	51.52
Zm00001d049533_P001	Maize	plastid	54.02	48.87
TraesCS1B01G457000.1	Wheat	mitochondrion	40.44	43.07
HORVU7Hr1G088720.8	Barley	extracellular, golgi	22.71	35.65
TraesCS1B01G457600.1	Wheat	mitochondrion	23.55	34.55
TraesCS1B01G458900.2	Wheat	mitochondrion	23.55	34.55
Os08t0161100-00	Rice	cytosol	20.5	33.48
HORVU1Hr1G049770.3	Barley	plastid	13.02	22.27
HORVU2Hr1G107420.2	Barley	plastid	11.36	20.2

Protein Annotations

EnsemblPlants:Bra029043.1	EnsemblPlants:Bra029043.1-P	EnsemblPlantsGene:Bra029043	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020
InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C	InterPro:Stomatin_fam	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10
PFAM:PF01145	PFAM:PF16200	PRINTS:PR00721	SEG:seg	SMART:SM00244	SUPFAM:SSF117892
UniParc:UPI000253FF63	UniProt:M4EJS7	MapMan:35.2	:	:	:

Description

AT4G27585 (E=3e-150) | band 7 family protein

Coordinates

chrA03:+:6028896..6031226

Molecular Weight (calculated)

39269.4 Da

IEP (calculated)

9.179

GRAVY (calculated)

-0.163

Length

361 amino acids

Sequence
(BLAST)

001: MMIRSRTAAT TAARSLGYLR HSSALVHSPL LSGATATTPS VRHFTSPVNS YQIKPPVNWG IRIVPEKRAC VIERFGKYVK TLESGIHFLV PGVDRIAYVH
101: SLKEEAIPIG NQTAITKDNV SIHIDGVLYV KIVNPHLASY GVENPIYAVM QLAQTTMRSE LGKITLDKTF EERDALNVKI VEAINVAAKD WGLECLRYEI
201: RDIMPPNGVR VAMEMQAEAE RKKRAQILES EGERQAHINI ADGKKSSVIL ESEDAKMDQV NRASGEAEAI LARAQATARG LTMLSQSLKE TGGVEAASLR
301: VAEQYIQAFG NIAKEGTTML LPSSAANPAN MIAQALTMYK SLVPNGGIQE TSAVESSSKA K

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.