Factsheet for Os08t0158500-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 1
mitochondrion 8
cytosol 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867
plastid: 27992503
plasma membrane: 28056797

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G299700.1	Wheat	mitochondrion, plastid	73.74	75.96
TraesCS7D01G295000.1	Wheat	mitochondrion	73.47	75.68
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	71.62	73.77
GSMUA_AchrUn_...	Banana	cytosol	52.25	65.67
PGSC0003DMT400069221	Potato	cytosol	51.19	63.07
EES13390	Sorghum	mitochondrion	65.78	62.63
Zm00001d024540_P001	Maize	mitochondrion	64.72	61.93
Solyc02g088360.1.1	Tomato	cytosol	20.69	58.21
CDX89237	Canola	mitochondrion	59.95	57.22
CDY43841	Canola	mitochondrion	54.38	57.1
CDY19053	Canola	mitochondrion	59.95	56.78
VIT_04s0023g01410.t01	Wine grape	mitochondrion	10.08	56.72
Bra029043.1-P	Field mustard	mitochondrion	54.11	56.51
Zm00001d049533_P001	Maize	plastid	59.68	56.39
CDY14335	Canola	plastid	54.11	56.04
KRH53657	Soybean	mitochondrion	59.15	55.2
KRH64272	Soybean	mitochondrion	59.15	55.2
AT4G27585.1	Thale cress	mitochondrion	59.68	54.74
Bra022695.1-P	Field mustard	mitochondrion	52.52	54.4
Solyc03g080050.2.1	Tomato	plastid	59.42	52.83
PGSC0003DMT400001564	Potato	mitochondrion	59.15	52.59
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	60.21	51.59
AT5G54100.1	Thale cress	mitochondrion	53.05	49.88
CDY46788	Canola	golgi	47.21	49.86
CDY43054	Canola	mitochondrion	54.64	49.05
CDY28794	Canola	plastid	51.99	48.51
Bra022696.1-P	Field mustard	plastid	51.99	48.51
Bra003016.1-P	Field mustard	cytosol	53.05	48.19
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	49.87	47.24
CDY41775	Canola	plastid	46.15	46.03
Os08t0161100-00	Rice	cytosol	22.81	38.91
CDY41774	Canola	mitochondrion	52.25	37.31
CDY28795	Canola	mitochondrion	51.46	36.26

Protein Annotations

Gene3D:3.30.479.30	MapMan:35.2	EntrezGene:4344707	EMBL:AK060393	ProteinID:BAC99654.1	ProteinID:BAF22950.1
ProteinID:BAT03914.1	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C	ncoils:Coil	ProteinID:EEE68078.1
GO:GO:0005575	GO:GO:0016020	EnsemblPlantsGene:Os08g0158500	EnsemblPlants:Os08t0158500-02	PFAM:PF01145	PFAM:PF16200
PRINTS:PR00721	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10	UniProt:Q7EZD2	SMART:SM00244	SUPFAM:SSF117892
InterPro:Stomatin_fam	UniParc:UPI00001D8DA3	RefSeq:XP_015650912.1	SEG:seg	:	:

Description

Similar to stomatin-like protein. (Os08t0158500-01);Similar to Stomatin-like protein. (Os08t0158500-02)

Coordinates

chr8:+:3420573..3424713

Molecular Weight (calculated)

41930.2 Da

IEP (calculated)

7.650

GRAVY (calculated)

-0.411

Length

377 amino acids

Sequence
(BLAST)

001: MATLLRRSVG PARQLLLRPR PLPLPHAASS TRSFSRYYSR DDVSRYEALS TPVNWGVSIV PEKKAFVVER FGKYVKTLGS GIHVLVPLVD RIAYVHSLKE
101: EAIPIPDQSA ITKDNVSIQI DGVLYVKIVD PYLASYGVEN PIFAVIQLAQ TTMRSELGKI TLDKTFEERD TLNEQIVRSI NEAATDWGLK CLRYEIRDIS
201: PPRGVKVAME MQAEAERKKR AQILESEGAM LDQANRAKGE AEAILAKSEA TARGIRLVSE AMRTKGSTEA ANLRVAEQYM KAFANLAKKS NTILLPSDAG
301: NPSSLIAQSL QIYKHICQTN SLKSGKYLTD ALEETEPEEE ELDSTDLPSL SSGMPSPDMP DDHDKTFSLQ RRNKDKH

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.