Factsheet for TraesCS7B01G187500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G295000.1	Wheat	mitochondrion	96.99	96.99
TraesCS7A01G299700.1	Wheat	mitochondrion, plastid	96.72	96.72
Os08t0158500-02	Rice	mitochondrion	73.77	71.62
GSMUA_AchrUn_...	Banana	cytosol	51.91	63.33
TraesCS4B01G000200.1	Wheat	mitochondrion	62.57	63.26
PGSC0003DMT400069221	Potato	cytosol	52.46	62.75
TraesCS5B01G556400.1	Wheat	mitochondrion	62.02	61.19
EES13390	Sorghum	mitochondrion	65.3	60.35
Zm00001d024540_P001	Maize	mitochondrion	64.48	59.9
CDY43841	Canola	mitochondrion	57.65	58.77
Bra029043.1-P	Field mustard	mitochondrion	56.56	57.34
CDY14335	Canola	plastid	56.56	56.87
Solyc02g088360.1.1	Tomato	cytosol	20.49	55.97
CDX89237	Canola	mitochondrion	60.11	55.7
CDY19053	Canola	mitochondrion	60.38	55.53
Zm00001d049533_P001	Maize	plastid	59.84	54.89
Bra022695.1-P	Field mustard	mitochondrion	54.1	54.4
KRH53657	Soybean	mitochondrion	59.56	53.96
KRH64272	Soybean	mitochondrion	59.56	53.96
VIT_04s0023g01410.t01	Wine grape	mitochondrion	9.84	53.73
AT4G27585.1	Thale cress	mitochondrion	58.47	52.07
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	62.3	51.82
AT5G54100.1	Thale cress	mitochondrion	56.01	51.12
CDY46788	Canola	golgi	49.73	50.98
Solyc03g080050.2.1	Tomato	plastid	58.47	50.47
PGSC0003DMT400001564	Potato	mitochondrion	58.2	50.24
CDY43054	Canola	mitochondrion	57.1	49.76
Bra003016.1-P	Field mustard	cytosol	55.46	48.92
CDY28794	Canola	plastid	53.01	48.02
Bra022696.1-P	Field mustard	plastid	53.01	48.02
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	51.09	46.98
TraesCS1B01G457000.1	Wheat	mitochondrion	43.44	46.9
CDY41775	Canola	plastid	46.45	44.97
CDY41774	Canola	mitochondrion	54.1	37.5
CDY28795	Canola	mitochondrion	53.83	36.82
TraesCS1B01G457600.1	Wheat	mitochondrion	22.95	34.15
TraesCS1B01G458900.2	Wheat	mitochondrion	22.95	34.15

Protein Annotations

EnsemblPlants:TraesCS7B01G187500.1	EnsemblPlantsGene:TraesCS7B01G187500	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020	InterPro:Band_7
InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C	InterPro:Stomatin_fam	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10	PFAM:PF01145
PFAM:PF16200	PRINTS:PR00721	SEG:seg	SMART:SM00244	SUPFAM:SSF117892	TIGR:cd08829
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:315725242..315733544

Molecular Weight (calculated)

40171.0 Da

IEP (calculated)

7.650

GRAVY (calculated)

-0.348

Length

366 amino acids

Sequence
(BLAST)

001: MATLLRRSAA PARQLLLLPR QLGAARSMSR YYARDEVSRF DALSTPVNWG VSIVPEKKAF VIERFGKYLK TLDSGIHGLV PLVDRIAYVH SLKEEAIPIP
101: DQSAITKDNV VIQIDGVLYV KIVDPYRASY GVENPIFAVI QLAQTTMRSE LGKITLDKTF EERDTLNEKI VRSINEASTD WGLKCLRYEI RDISPPPGVK
201: NAMEMQAEAE RRKRAQILQS EGAMLDQANR AKGEAEAILS KSQATAEGIR MVSESMRAEG SAEAAKLRIA EQYITAFAAL AKNTTTMLLP SDAGNPSSMI
301: AQSLQIYKHI SQSSSPKGGN QQAEEVEEAG PQEEADTFGL PSVTSAMPPS TQTGHGSTFS LQKRKE

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.