Factsheet for TraesCS1B01G457000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G556400.1	Wheat	mitochondrion	50.15	45.82
TraesCS4B01G000200.1	Wheat	mitochondrion	48.67	45.58
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	46.9	43.44
VIT_04s0023g01410.t01	Wine grape	mitochondrion	8.55	43.28
GSMUA_AchrUn_...	Banana	cytosol	38.05	43.0
PGSC0003DMT400069221	Potato	cytosol	36.87	40.85
Bra029043.1-P	Field mustard	mitochondrion	43.07	40.44
Solyc02g088360.1.1	Tomato	cytosol	15.93	40.3
TraesCS1B01G458900.2	Wheat	mitochondrion	28.91	39.84
TraesCS1B01G457600.1	Wheat	mitochondrion	28.91	39.84
CDY43841	Canola	mitochondrion	41.89	39.55
CDY14335	Canola	plastid	41.59	38.74
CDX89237	Canola	mitochondrion	44.25	37.97
CDY19053	Canola	mitochondrion	44.54	37.94
Bra022695.1-P	Field mustard	mitochondrion	39.82	37.09
KRH64272	Soybean	mitochondrion	43.95	36.88
KRH53657	Soybean	mitochondrion	43.36	36.39
Bra022696.1-P	Field mustard	plastid	43.07	36.14
CDY28794	Canola	plastid	43.07	36.14
AT5G54100.1	Thale cress	mitochondrion	42.48	35.91
AT4G27585.1	Thale cress	mitochondrion	43.07	35.52
CDY43054	Canola	mitochondrion	43.66	35.24
CDY46788	Canola	golgi	36.28	34.45
CDY41775	Canola	plastid	38.05	34.13
Bra003016.1-P	Field mustard	cytosol	41.0	33.49
PGSC0003DMT400001564	Potato	mitochondrion	41.89	33.49
Solyc03g080050.2.1	Tomato	plastid	41.89	33.49
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	42.18	32.5
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	37.76	32.16
CDY28795	Canola	mitochondrion	41.59	26.36
CDY41774	Canola	mitochondrion	39.82	25.57

Protein Annotations

EnsemblPlants:TraesCS1B01G457000.1	EnsemblPlantsGene:TraesCS1B01G457000	Gene3D:3.30.479.30	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C
ncoils:Coil	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10	PFAM:PF01145	PFAM:PF16200	SMART:SM00244
SUPFAM:SSF117892	TIGR:cd08829	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr1B:-:671293643..671296595

Molecular Weight (calculated)

37415.6 Da

IEP (calculated)

8.458

GRAVY (calculated)

-0.182

Length

339 amino acids

Sequence
(BLAST)

001: MAMSTATRMM RLHARRSSAF CLLRSSRPDP PQLQGLGSSC RWYRGATAAV GPLSTPVNLG VSIVPERKVF VVERLGMYHK SLSSGIHFLV PGIDRIAYVH
101: SLEEEAIQIP DNPAITKDGT LIQIGGVLHV KIADPFLASY AIENPIYAVT HLAEFVAGSE ICKITLDKTF KERDTLNHNI MKSINYASCE WGVKCLKYNI
201: RITPTEGAKK AMEMQLEAES MMERVKKAKG EGEAILARFE ATVRGIVMDP ESFKTEGSTE AARLKVAEEY MEVFSKLAKN MKTMLLPRVP GNWGAIIAQS
301: QPAVLPEDLD DLSRKMPSIS DMGGVLSDDK DPLPHPKQK

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.