CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022696.1-P	Field mustard	plastid	100.0	100.0
CDY41775	Canola	plastid	89.36	95.5
CDY43841	Canola	mitochondrion	66.09	74.37
CDY14335	Canola	plastid	63.12	70.05
PGSC0003DMT400069221	Potato	cytosol	52.23	68.95
CDY43054	Canola	mitochondrion	69.8	67.14
CDY46788	Canola	golgi	57.67	65.27
CDX89237	Canola	mitochondrion	63.61	65.06
GSMUA_AchrUn_...	Banana	cytosol	48.02	64.67
CDY19053	Canola	mitochondrion	63.61	64.57
AT5G54100.1	Thale cress	mitochondrion	62.38	62.84
HORVU0Hr1G021000.1	Barley	plastid	35.15	60.17
KRH64272	Soybean	mitochondrion	58.42	58.42
KRH53657	Soybean	mitochondrion	57.92	57.92
VIT_09s0002g01630.t01	Wine grape	mitochondrion	59.16	56.9
Solyc03g080050.2.1	Tomato	plastid	56.44	53.77
PGSC0003DMT400001564	Potato	mitochondrion	56.44	53.77
TraesCS4A01G000200.1	Wheat	mitochondrion	47.03	53.52
TraesCS7D01G295000.1	Wheat	mitochondrion	48.27	53.28
TraesCS7A01G299700.1	Wheat	mitochondrion, plastid	48.02	53.01
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	48.02	53.01
TraesCS4B01G000200.1	Wheat	mitochondrion	47.03	52.49
CDY41774	Canola	mitochondrion	68.56	52.46
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	51.49	52.26
Os08t0158500-02	Rice	mitochondrion	48.51	51.99
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	56.44	51.82
HORVU6Hr1G021720.1	Barley	mitochondrion	31.68	51.61
CDY28795	Canola	mitochondrion	67.57	51.03
TraesCS5D01G552400.1	Wheat	mitochondrion	47.28	50.8
TraesCS5B01G556400.1	Wheat	mitochondrion	46.53	50.67
TraesCS4D01G000200.3	Wheat	mitochondrion	46.78	50.67
HORVU4Hr1G000580.1	Barley	plasma membrane	46.53	49.87
TraesCS4A01G322100.1	Wheat	mitochondrion	43.81	49.3
EES13390	Sorghum	mitochondrion	47.03	47.98
Zm00001d024540_P001	Maize	mitochondrion	46.53	47.72
Zm00001d049533_P001	Maize	plastid	46.29	46.87
TraesCS1B01G457000.1	Wheat	mitochondrion	36.14	43.07
Os08t0161100-00	Rice	cytosol	18.81	34.39
HORVU7Hr1G088720.8	Barley	extracellular, golgi	19.31	33.91
TraesCS1B01G458900.2	Wheat	mitochondrion	20.05	32.93
TraesCS1B01G457600.1	Wheat	mitochondrion	20.05	32.93
HORVU1Hr1G049770.3	Barley	plastid	13.86	26.54
HORVU2Hr1G107420.2	Barley	plastid	12.13	24.14

Protein Annotations

EnsemblPlants:CDY28794	EnsemblPlantsGene:GSBRNA2T00041445001	Gene3D:3.30.479.30	GO:A0A078GUF9	GO:GO:0005575	GO:GO:0016020
InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C	InterPro:Stomatin_fam	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10
PFAM:PF01145	PFAM:PF16200	PRINTS:PR00721	ProteinID:CDY28794	ProteinID:CDY28794.1	SMART:SM00244
SUPFAM:SSF117892	UniParc:UPI0002546A28	UniProt:A0A078GUF9	MapMan:35.2	:	:

Description

BnaA02g09860DBnaA02g09860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUF9]

Coordinates

chrLK032226:+:288188..290437

Molecular Weight (calculated)

43572.5 Da

IEP (calculated)

9.401

GRAVY (calculated)

-0.095

Length

404 amino acids

Sequence
(BLAST)

001: MNQLVSSPSF GQAAVRSLNY IRPLCAALPL ISAGLNAASK PATTTVRKFS SSPVPNINRL KPPAAPMTQL SSAASAFVRN FSSNSSASAV LDRFQITPQT
101: NWGVRIVPER KACVVERFGK YVKTLGSGIH FLVPGVDRIA YVHSLKEEAI PIGNQSAITK DNVSINIDGV LYVKIVDPKL ASYGVENPVY AVVQLAQTTM
201: RSELGKITLD KTFEERDTLN EKIVEAINVA AKHWGLECLR YEIKDIMPPN GVKVAMEMQA EAERRKRAQI LESEGTRQAH INIADGKKSS VILESEAAKM
301: DQVNRASGEA EAILARAQAT ARGLTMLSQS IKETGGVEAA SLRVAEKYIE AFGNIAKEGT TMLLPSSAEN PANMIAQALT MYKSLVPKSA LQETLAVESS
401: DVVT

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.