Factsheet for TraesCS5B01G556400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G552400.1	Wheat	mitochondrion	92.18	90.96
TraesCS4B01G000200.1	Wheat	mitochondrion	87.87	90.06
TraesCS4A01G322100.1	Wheat	mitochondrion	86.25	89.14
HORVU4Hr1G000580.1	Barley	plasma membrane	83.02	81.7
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	61.19	62.02
PGSC0003DMT400069221	Potato	cytosol	50.94	61.76
GSMUA_AchrUn_...	Banana	cytosol	48.52	60.0
CDY43841	Canola	mitochondrion	54.45	56.27
Bra029043.1-P	Field mustard	mitochondrion	53.91	55.4
Solyc02g088360.1.1	Tomato	cytosol	19.95	55.22
CDY14335	Canola	plastid	52.56	53.57
KRH53657	Soybean	mitochondrion	57.14	52.48
Bra022695.1-P	Field mustard	mitochondrion	51.21	52.2
KRH64272	Soybean	mitochondrion	56.6	51.98
CDX89237	Canola	mitochondrion	55.26	51.9
CDY19053	Canola	mitochondrion	55.26	51.51
Solyc03g080050.2.1	Tomato	plastid	58.22	50.94
PGSC0003DMT400001564	Potato	mitochondrion	58.22	50.94
VIT_04s0023g01410.t01	Wine grape	mitochondrion	9.16	50.75
AT5G54100.1	Thale cress	mitochondrion	54.72	50.62
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	59.57	50.23
TraesCS1B01G457000.1	Wheat	mitochondrion	45.82	50.15
CDY46788	Canola	golgi	47.44	49.3
AT4G27585.1	Thale cress	mitochondrion	53.64	48.42
CDY43054	Canola	mitochondrion	54.45	48.1
Bra003016.1-P	Field mustard	cytosol	53.37	47.71
CDY28794	Canola	plastid	50.67	46.53
Bra022696.1-P	Field mustard	plastid	50.67	46.53
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	48.79	45.48
CDY41775	Canola	plastid	44.47	43.65
TraesCS1B01G457600.1	Wheat	mitochondrion	24.53	36.99
TraesCS1B01G458900.2	Wheat	mitochondrion	24.53	36.99
CDY41774	Canola	mitochondrion	51.21	35.98
CDY28795	Canola	mitochondrion	50.94	35.33

Protein Annotations

EnsemblPlants:TraesCS5B01G556400.1	EnsemblPlantsGene:TraesCS5B01G556400	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020	InterPro:Band_7
InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C	InterPro:Stomatin_fam	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10	PFAM:PF01145
PFAM:PF16200	PRINTS:PR00721	SEG:seg	SMART:SM00244	SUPFAM:SSF117892	TIGR:cd08829
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:704992626..704995560

Molecular Weight (calculated)

40034.3 Da

IEP (calculated)

9.149

GRAVY (calculated)

-0.246

Length

371 amino acids

Sequence
(BLAST)

001: MTMSTATRML ARRAAPGLLR SAAAAATGPS PALALPALLQ AQGGGRRWYR AAGGDPSPLL YEPPPTPANL GLSIVPEKKA FVVERFGKYL KTLSSGIHLL
101: MPGVDRIAYV HSLKEEAIPI PENSAITKDN VSIQIGGVLY VKIVDPCMAS YGVENPIYAV IQLAQTTMRS ELGKVTLDKT FEERDTLNTN IVKSINEAAD
201: TWGLKCLRYE IRDITPPEGV KKAMEMQAAA ERKKRAQILE SEGAMMENAN KAKGEAEAIL ARSQATAEGI RMVSESFKTE GSTEAASLRI AEQYIRAFSE
301: LARTTNTMLL PSDAGNPGTM IAQALQIYNH TYKQKLTLGS PSPSPSKRAE EADLSLGMPS VSDLGTFQHQ K

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.