Factsheet for Bra022695.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029043.1-P	Field mustard	mitochondrion	74.73	75.35
PGSC0003DMT400069221	Potato	cytosol	58.79	69.93
Bra022696.1-P	Field mustard	plastid	76.37	68.81
CDY41774	Canola	mitochondrion	92.58	63.83
GSMUA_AchrUn_...	Banana	cytosol	52.2	63.33
Bra003016.1-P	Field mustard	cytosol	71.43	62.65
AT5G54100.1	Thale cress	mitochondrion	68.13	61.85
HORVU0Hr1G021000.1	Barley	plastid	39.84	61.44
KRH64272	Soybean	mitochondrion	67.86	61.14
KRH53657	Soybean	mitochondrion	67.31	60.64
VIT_09s0002g01630.t01	Wine grape	mitochondrion	65.11	56.43
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	54.4	54.1
TraesCS7D01G295000.1	Wheat	mitochondrion	54.12	53.83
TraesCS7A01G299700.1	Wheat	mitochondrion, plastid	53.85	53.55
PGSC0003DMT400001564	Potato	mitochondrion	61.81	53.07
Solyc03g080050.2.1	Tomato	plastid	61.81	53.07
TraesCS4A01G000200.1	Wheat	mitochondrion	51.65	52.96
Os08t0158500-02	Rice	mitochondrion	54.4	52.52
TraesCS4B01G000200.1	Wheat	mitochondrion	51.65	51.93
HORVU6Hr1G021720.1	Barley	mitochondrion	35.16	51.61
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	56.32	51.51
TraesCS5B01G556400.1	Wheat	mitochondrion	52.2	51.21
TraesCS5D01G552400.1	Wheat	mitochondrion	52.75	51.06
TraesCS4D01G000200.3	Wheat	mitochondrion	52.2	50.94
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	60.16	49.77
HORVU4Hr1G000580.1	Barley	plasma membrane	51.37	49.6
TraesCS4A01G322100.1	Wheat	mitochondrion	48.9	49.58
Zm00001d024540_P001	Maize	mitochondrion	52.75	48.73
EES13390	Sorghum	mitochondrion	52.47	48.23
Zm00001d049533_P001	Maize	plastid	50.55	46.12
TraesCS1B01G457000.1	Wheat	mitochondrion	37.09	39.82
Os08t0161100-00	Rice	cytosol	20.6	33.94
HORVU7Hr1G088720.8	Barley	extracellular, golgi	21.15	33.48
TraesCS1B01G458900.2	Wheat	mitochondrion	21.98	32.52
TraesCS1B01G457600.1	Wheat	mitochondrion	21.98	32.52
HORVU1Hr1G049770.3	Barley	plastid	14.29	24.64
HORVU2Hr1G107420.2	Barley	plastid	12.91	23.15

Protein Annotations

EnsemblPlants:Bra022695.1	EnsemblPlants:Bra022695.1-P	EnsemblPlantsGene:Bra022695	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020
InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C	InterPro:Stomatin_fam	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10
PFAM:PF01145	PFAM:PF16200	PRINTS:PR00721	SEG:seg	SMART:SM00244	SUPFAM:SSF117892
UniParc:UPI0002546A29	UniProt:M4E1P5	MapMan:35.2	:	:	:

Description

AT4G27585 (E=3e-138) | band 7 family protein

Coordinates

chrA02:+:7968134..7970343

Molecular Weight (calculated)

39872.1 Da

IEP (calculated)

9.733

GRAVY (calculated)

-0.265

Length

364 amino acids

Sequence
(BLAST)

001: MNQIIRSRSV ASNAVRSLRQ SPLVSGATAT TTPVRHFSSS PGHAFNRINP PANWGIRIVP EKKACVIERF GKYAKTLESG IHFLVPGVDR IAYVHSLKEE
101: AIPIGNQTAI TKDNVSIQID GVLYVKIVNP HLASYGVENP IYAVVQLAQT TMRSELGKMT LDKTFEERDT LNEKIVEAIN VAAKHWGLEC LRYEIRDIMP
201: PNGVRVAMEM QAEAERKKRA QILESEGERQ AHINIADGKK SSVILESEAA KMDQVNRASG EAEAIIARAK ATARGLAMLS QSLKETGGVE AAGLRVAEQY
301: IHAFGNIAKE GTTMLLPSSA ENPANMIAQA LTMYKSLVPK GGLQETSAVE PLLKRNRRRV VEEN

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.