Factsheet for TraesCS4B01G000200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G000200.1	Wheat	mitochondrion	98.07	100.0
TraesCS4D01G000200.3	Wheat	mitochondrion	94.48	91.69
TraesCS5B01G556400.1	Wheat	mitochondrion	90.06	87.87
HORVU4Hr1G000580.1	Barley	plasma membrane	84.25	80.9
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	63.26	62.57
PGSC0003DMT400069221	Potato	cytosol	52.49	62.09
GSMUA_AchrUn_...	Banana	cytosol	50.55	61.0
CDY43841	Canola	mitochondrion	54.7	55.15
Bra029043.1-P	Field mustard	mitochondrion	54.7	54.85
Solyc02g088360.1.1	Tomato	cytosol	20.17	54.48
CDY14335	Canola	plastid	53.59	53.3
VIT_04s0023g01410.t01	Wine grape	mitochondrion	9.67	52.24
KRH53657	Soybean	mitochondrion	58.01	51.98
CDX89237	Canola	mitochondrion	56.63	51.9
KRH64272	Soybean	mitochondrion	57.73	51.73
Bra022695.1-P	Field mustard	mitochondrion	51.93	51.65
AT5G54100.1	Thale cress	mitochondrion	57.18	51.62
CDY19053	Canola	mitochondrion	56.63	51.51
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	60.77	50.0
Solyc03g080050.2.1	Tomato	plastid	58.29	49.76
PGSC0003DMT400001564	Potato	mitochondrion	58.29	49.76
TraesCS1B01G457000.1	Wheat	mitochondrion	45.58	48.67
CDY46788	Canola	golgi	47.79	48.46
AT4G27585.1	Thale cress	mitochondrion	54.7	48.18
Bra003016.1-P	Field mustard	cytosol	54.97	47.95
CDY43054	Canola	mitochondrion	55.25	47.62
CDY28794	Canola	plastid	52.49	47.03
Bra022696.1-P	Field mustard	plastid	52.49	47.03
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	50.83	46.23
CDY41775	Canola	plastid	45.58	43.65
TraesCS1B01G457600.1	Wheat	mitochondrion	25.41	37.4
TraesCS1B01G458900.2	Wheat	mitochondrion	25.41	37.4
CDY41774	Canola	mitochondrion	52.76	36.17
CDY28795	Canola	mitochondrion	53.04	35.89

Protein Annotations

EnsemblPlants:TraesCS4B01G000200.1	EnsemblPlantsGene:TraesCS4B01G000200	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020	InterPro:Band_7
InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C	InterPro:Stomatin_fam	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10	PFAM:PF01145
PFAM:PF16200	PRINTS:PR00721	SEG:seg	SMART:SM00244	SUPFAM:SSF117892	TIGR:cd08829
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:230240..233149

Molecular Weight (calculated)

39315.3 Da

IEP (calculated)

8.354

GRAVY (calculated)

-0.277

Length

362 amino acids

Sequence
(BLAST)

001: MSMAATRMLA RRAAPGLLRS AASPGLALPA VLQAQGRWYR AAGGDPSPSF YEPPPTPANL GLSIVPEKKA FVVERFGKYL KTLSSGIHLL MPGVDRIAYV
101: HSLKEEAIPI PDNSAITKDN VSIQIGGVLY VKIVDPYMAS YGVENPVYAV IQLAQTTMRS ELGKITLDKT FEERDTLNTN IVKSINEAAE TWGLKCLRYE
201: IRDITPPDGV KKAMEMQAAA ERKKRAQILE SEGAMMENAN KAKGEAEAIL ARSQATAEGI RMVSESFKTE GSTEAASLRI AEQYIRAFSE LARSTNTMLL
301: PSDAGNPGTM IAQALQIYNH TYKQKLTLGS PSPSPSKRAE EEADLSLGMP SVSDLGTFEH HK

Best Arabidopsis Sequence Match ( AT5G54100.1 )
(BLAST)

001: MNQLALSRSG YTAAVRFLPM LSAAVPKILS SLAAASTVRN FSSTGSPLTS YQINKPSPSK SFTSRLLHQS SSAGTPPQQL FGARSFSSPS SDFNSYHINP
101: PSNWGIRIVP ERKACVIERF GKFHTTLPAG IHFLVPFVDR IAYVHSLKEE AIPIGNQTAI TKDNVSIHID GVLYVKIVDP KLASYGVENP IYAVMQLAQT
201: TMRSELGKIT LDKTFEERDT LNEKIVEAIN VAAKDWGLQC LRYEIRDIMP PNGVRVAMEM QAEAERKKRA QILESEGERQ AHINRADGKK SSVILESEAA
301: MMDQVNRAQG EAEAILARAQ ATAKGLAMVS QSLKEAGGEE AASLRVAEQY IQAFGKIAKE GTTMLLPSNV DNPASMIAQA LGMYKGLSTK VPTVVSGKLL
401: E

Arabidopsis Description

At5g54100 [Source:UniProtKB/TrEMBL;Acc:Q9LVW0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.