Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14335 | Canola | plastid | 73.25 | 83.52 |
| Bra029043.1-P | Field mustard | mitochondrion | 71.33 | 81.99 |
| CDY46788 | Canola | golgi | 66.75 | 77.59 |
| PGSC0003DMT400069221 | Potato | cytosol | 53.98 | 73.2 |
| Bra022695.1-P | Field mustard | mitochondrion | 62.65 | 71.43 |
| AT5G54100.1 | Thale cress | mitochondrion | 65.06 | 67.33 |
| GSMUA_AchrUn_... | Banana | cytosol | 48.19 | 66.67 |
| Bra022696.1-P | Field mustard | plastid | 62.89 | 64.6 |
| HORVU0Hr1G021000.1 | Barley | plastid | 36.14 | 63.56 |
| KRH53657 | Soybean | mitochondrion | 60.24 | 61.88 |
| KRH64272 | Soybean | mitochondrion | 60.0 | 61.63 |
| VIT_09s0002g01630.t01 | Wine grape | mitochondrion | 60.96 | 60.24 |
| Solyc06g073030.1.1 | Tomato | endoplasmic reticulum, extracellular | 54.22 | 56.53 |
| Solyc03g080050.2.1 | Tomato | plastid | 57.11 | 55.9 |
| TraesCS4A01G000200.1 | Wheat | mitochondrion | 47.71 | 55.77 |
| PGSC0003DMT400001564 | Potato | mitochondrion | 56.87 | 55.66 |
| TraesCS7D01G295000.1 | Wheat | mitochondrion | 48.92 | 55.46 |
| TraesCS7B01G187500.1 | Wheat | golgi, mitochondrion | 48.92 | 55.46 |
| HORVU6Hr1G021720.1 | Barley | mitochondrion | 33.01 | 55.24 |
| TraesCS7A01G299700.1 | Wheat | mitochondrion, plastid | 48.67 | 55.19 |
| TraesCS4B01G000200.1 | Wheat | mitochondrion | 47.95 | 54.97 |
| TraesCS4D01G000200.3 | Wheat | mitochondrion | 48.92 | 54.42 |
| TraesCS5D01G552400.1 | Wheat | mitochondrion | 48.67 | 53.72 |
| TraesCS5B01G556400.1 | Wheat | mitochondrion | 47.71 | 53.37 |
| Os08t0158500-02 | Rice | mitochondrion | 48.19 | 53.05 |
| HORVU4Hr1G000580.1 | Barley | plasma membrane | 48.19 | 53.05 |
| GSMUA_Achr7P04660_001 | Banana | golgi, mitochondrion | 56.14 | 52.95 |
| TraesCS4A01G322100.1 | Wheat | mitochondrion | 44.34 | 51.25 |
| Zm00001d024540_P001 | Maize | mitochondrion | 47.23 | 49.75 |
| EES13390 | Sorghum | mitochondrion | 46.99 | 49.24 |
| Zm00001d049533_P001 | Maize | plastid | 46.75 | 48.62 |
| TraesCS1B01G457000.1 | Wheat | mitochondrion | 33.49 | 41.0 |
| HORVU7Hr1G088720.8 | Barley | extracellular, golgi | 19.76 | 35.65 |
| Os08t0161100-00 | Rice | cytosol | 18.8 | 35.29 |
| TraesCS1B01G458900.2 | Wheat | mitochondrion | 20.24 | 34.15 |
| TraesCS1B01G457600.1 | Wheat | mitochondrion | 20.24 | 34.15 |
| HORVU1Hr1G049770.3 | Barley | plastid | 13.01 | 25.59 |
| HORVU2Hr1G107420.2 | Barley | plastid | 11.33 | 23.15 |
Protein Annotations
| EnsemblPlants:Bra003016.1 | EnsemblPlants:Bra003016.1-P | EnsemblPlantsGene:Bra003016 | Gene3D:3.30.479.30 | GO:GO:0005575 | GO:GO:0016020 |
| InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf | InterPro:Band_7_C | InterPro:Stomatin_fam | PANTHER:PTHR43327 | PANTHER:PTHR43327:SF10 |
| PFAM:PF01145 | PFAM:PF16200 | PRINTS:PR00721 | SEG:seg | SMART:SM00244 | SUPFAM:SSF117892 |
| UniParc:UPI0002543CE3 | UniProt:M4CFN4 | MapMan:35.2 | : | : | : |
Description
AT4G27585 (E=6e-145) | band 7 family protein
Coordinates
chrA10:-:6021772..6024526
Molecular Weight (calculated)
45559.5 Da
IEP (calculated)
8.430
GRAVY (calculated)
-0.277
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNRICRNPI SQHNTAIPWL AYEHDNHFAG DDLDNVTVKY PRGSNIREME SPIPFTSGSR EISVALRSIS YLRQSSALFH SLPGATATTT PVRHFSSPGH
101: AFNSYQIKPP TNWGIRIVPE KKACVIERFG KYVKTLDSGI HFLVPGVDRI AYVHSLKEEA IPIGNQTAIT KDNVSIHIDG VLYVKIVNPH LASYGVENPI
201: YAVMQLAQTT MRSELGKITL DKTFEERDTL NEKIVEAINV AAKDWGLECL RYEMRDIMPP NGVRVAMEMQ AEAERKKRAQ ILESEGERQA HINIADGKKR
301: SVILESEAAK INQVNRASGE AEAIIARAQA TARGLTMLSQ SLNETGGVEA ASMRIAEQYI QAFGNIAKEG TTMLLPSSAA NPANMIAQAL TMYKSLVPNG
401: GIQESSAVVS SSKAK
101: AFNSYQIKPP TNWGIRIVPE KKACVIERFG KYVKTLDSGI HFLVPGVDRI AYVHSLKEEA IPIGNQTAIT KDNVSIHIDG VLYVKIVNPH LASYGVENPI
201: YAVMQLAQTT MRSELGKITL DKTFEERDTL NEKIVEAINV AAKDWGLECL RYEMRDIMPP NGVRVAMEMQ AEAERKKRAQ ILESEGERQA HINIADGKKR
301: SVILESEAAK INQVNRASGE AEAIIARAQA TARGLTMLSQ SLNETGGVEA ASMRIAEQYI QAFGNIAKEG TTMLLPSSAA NPANMIAQAL TMYKSLVPNG
401: GIQESSAVVS SSKAK
001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q
Arabidopsis Description
SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.