Factsheet for TraesCS1B01G458900.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G457600.1	Wheat	mitochondrion	100.0	100.0
VIT_04s0023g01410.t01	Wine grape	mitochondrion	9.35	34.33
TraesCS1B01G457000.1	Wheat	mitochondrion	39.84	28.91
Solyc02g088360.1.1	Tomato	cytosol	15.04	27.61
GSMUA_AchrUn_...	Banana	cytosol	32.52	26.67
TraesCS4B01G000200.1	Wheat	mitochondrion	37.4	25.41
PGSC0003DMT400069221	Potato	cytosol	30.89	24.84
TraesCS5B01G556400.1	Wheat	mitochondrion	36.99	24.53
CDY43841	Canola	mitochondrion	35.37	24.23
Bra029043.1-P	Field mustard	mitochondrion	34.55	23.55
KRH53657	Soybean	mitochondrion	37.8	23.02
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	34.15	22.95
CDY14335	Canola	plastid	33.74	22.8
KRH64272	Soybean	mitochondrion	36.99	22.52
CDX89237	Canola	mitochondrion	35.77	22.28
CDY19053	Canola	mitochondrion	35.77	22.11
Bra022695.1-P	Field mustard	mitochondrion	32.52	21.98
AT5G54100.1	Thale cress	mitochondrion	35.37	21.7
AT4G27585.1	Thale cress	mitochondrion	35.37	21.17
CDY46788	Canola	golgi	30.08	20.73
CDY43054	Canola	mitochondrion	34.96	20.48
Bra003016.1-P	Field mustard	cytosol	34.15	20.24
CDY28794	Canola	plastid	32.93	20.05
Bra022696.1-P	Field mustard	plastid	32.93	20.05
PGSC0003DMT400001564	Potato	mitochondrion	33.74	19.58
Solyc03g080050.2.1	Tomato	plastid	33.74	19.58
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	31.3	19.35
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	33.33	18.64
CDY41775	Canola	plastid	27.24	17.72
CDY41774	Canola	mitochondrion	32.11	14.96
CDY28795	Canola	mitochondrion	32.52	14.95

Protein Annotations

EnsemblPlants:TraesCS1B01G458900.2	EnsemblPlantsGene:TraesCS1B01G458900	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020	InterPro:Band_7
InterPro:Band_7/SPFH_dom_sf	InterPro:Stomatin_fam	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10	PFAM:PF01145	PRINTS:PR00721
SMART:SM00244	SUPFAM:SSF117892	TIGR:cd08829	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr1B:-:672680489..672685127

Molecular Weight (calculated)

27500.1 Da

IEP (calculated)

7.070

GRAVY (calculated)

-0.224

Length

246 amino acids

Sequence
(BLAST)

001: MAMWMSAATR AMRVHARRTP ASFLLRDSAR PDPNRALLQG QAPAPRWYSG AAAGADPPSI PFPAHLGVAT VPDLHVFVVE RFGHYHKILP SGVHFLLPVV
101: DRIAYVHSLK VKPIRIPNYP AVTKDNALIQ FGGLLHLQIS DPFLASYAVD GNPIHAVTQL AETVQMREIG KMTLEQSFEQ RDQLDRNIMK SMNDAACEWG
201: VECIKYEFCI QWERSKSLYE VLSTSDDMGG VLSDDKQEPV PHTKQE

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.