CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029043.1-P	Field mustard	mitochondrion	85.71	99.72
CDY43841	Canola	mitochondrion	77.86	91.09
CDY14335	Canola	plastid	74.52	85.99
CDY46788	Canola	golgi	64.52	75.91
PGSC0003DMT400069221	Potato	cytosol	55.0	75.49
CDY19053	Canola	mitochondrion	68.1	71.86
CDX89237	Canola	mitochondrion	67.38	71.65
CDY28794	Canola	plastid	67.14	69.8
GSMUA_AchrUn_...	Banana	cytosol	48.81	68.33
CDY41775	Canola	plastid	60.71	67.46
AT5G54100.1	Thale cress	mitochondrion	63.1	66.08
HORVU0Hr1G021000.1	Barley	plastid	36.19	64.41
KRH64272	Soybean	mitochondrion	61.67	64.11
KRH53657	Soybean	mitochondrion	61.67	64.11
VIT_09s0002g01630.t01	Wine grape	mitochondrion	60.95	60.95
HORVU6Hr1G021720.1	Barley	mitochondrion	34.29	58.06
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	49.76	57.1
Solyc03g080050.2.1	Tomato	plastid	57.62	57.08
PGSC0003DMT400001564	Potato	mitochondrion	57.38	56.84
TraesCS7D01G295000.1	Wheat	mitochondrion	49.52	56.83
TraesCS7A01G299700.1	Wheat	mitochondrion, plastid	49.29	56.56
TraesCS4A01G000200.1	Wheat	mitochondrion	47.38	56.06
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	53.1	56.03
CDY41774	Canola	mitochondrion	70.24	55.87
TraesCS4B01G000200.1	Wheat	mitochondrion	47.62	55.25
TraesCS4D01G000200.3	Wheat	mitochondrion	48.57	54.69
Os08t0158500-02	Rice	mitochondrion	49.05	54.64
TraesCS5B01G556400.1	Wheat	mitochondrion	48.1	54.45
TraesCS5D01G552400.1	Wheat	mitochondrion	48.57	54.26
HORVU4Hr1G000580.1	Barley	plasma membrane	47.86	53.32
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	55.24	52.73
TraesCS4A01G322100.1	Wheat	mitochondrion	45.0	52.65
Zm00001d024540_P001	Maize	mitochondrion	49.29	52.54
CDY28795	Canola	mitochondrion	66.9	52.52
EES13390	Sorghum	mitochondrion	49.29	52.27
Zm00001d049533_P001	Maize	plastid	47.14	49.62
TraesCS1B01G457000.1	Wheat	mitochondrion	35.24	43.66
HORVU7Hr1G088720.8	Barley	extracellular, golgi	20.0	36.52
TraesCS1B01G458900.2	Wheat	mitochondrion	20.48	34.96
TraesCS1B01G457600.1	Wheat	mitochondrion	20.48	34.96
Os08t0161100-00	Rice	cytosol	17.62	33.48
HORVU1Hr1G049770.3	Barley	plastid	11.19	22.27
HORVU2Hr1G107420.2	Barley	plastid	9.76	20.2

Protein Annotations

EnsemblPlants:CDY43054	EnsemblPlantsGene:GSBRNA2T00075887001	Gene3D:3.30.479.30	GO:A0A078I0I2	GO:GO:0005575	GO:GO:0016020
InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C	InterPro:Stomatin_fam	PANTHER:PTHR43327	PANTHER:PTHR43327:SF10
PFAM:PF01145	PFAM:PF16200	PRINTS:PR00721	ProteinID:CDY43054	ProteinID:CDY43054.1	SEG:seg
SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI0004EE6646	UniProt:A0A078I0I2	MapMan:35.2	:

Description

BnaA03g12010DBnaA03g12010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0I2]

Coordinates

chrLK032543:+:231996..234882

Molecular Weight (calculated)

45810.4 Da

IEP (calculated)

8.560

GRAVY (calculated)

-0.175

Length

420 amino acids

Sequence
(BLAST)

001: MMIRSRTAAT TAARSLGYLR HSSALVHSPL LSGATATTPS VRHFTSPVNS YQIKPPVNWG IRIVPEKRAC VIERFGKYVK TLESGIHFLV PGVDRIAYVH
101: SLKEEAIPIG NQTAITKDNV SIHIDGVLYV KIVNPHLASY GVENPIYAVM QLAQTTMRSE LGKITLDKTF EERDALNVKI VEAINVAAKD WGLECLRYEI
201: RDIMPPNGVR VAMEMQAEAE RKKRAQILES EGKLADLCAA EAINVAAKDW GLECLRYEIR DIMPPNGVRV AMEMQAEAER KKRAQILESE GERQAHINIA
301: DGKKSSVILE SEAAKMDQVN RASGEAEAIL ARAQATARGL TMLSQSLKET GGVEAASLRV AEQYIQAFGN IAKEGTTMLL PSSAANPANM IAQALTMYKS
401: LVPNGGIQET SAVESSSKAK

Best Arabidopsis Sequence Match ( AT4G27585.1 )
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Arabidopsis Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.