Factsheet for AT4G27585.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89237	Canola	mitochondrion	82.97	86.33
CDY19053	Canola	mitochondrion	83.45	86.18
PGSC0003DMT400069221	Potato	cytosol	56.93	76.47
GSMUA_AchrUn_...	Banana	cytosol	50.37	69.0
KRH64272	Soybean	mitochondrion	66.91	68.07
KRH53657	Soybean	mitochondrion	65.94	67.08
AT5G54100.1	Thale cress	mitochondrion	64.23	65.84
HORVU0Hr1G021000.1	Barley	plastid	37.47	65.25
VIT_09s0002g01630.t01	Wine grape	mitochondrion	63.5	62.14
Solyc03g080050.2.1	Tomato	plastid	63.75	61.79
PGSC0003DMT400001564	Potato	mitochondrion	63.26	61.32
Os08t0158500-02	Rice	mitochondrion	54.74	59.68
TraesCS7D01G295000.1	Wheat	mitochondrion	52.55	59.02
Solyc06g073030.1.1	Tomato	endoplasmic reticulum, extracellular	56.93	58.79
TraesCS7A01G299700.1	Wheat	mitochondrion, plastid	52.31	58.74
TraesCS7B01G187500.1	Wheat	golgi, mitochondrion	52.07	58.47
HORVU6Hr1G021720.1	Barley	mitochondrion	35.28	58.47
TraesCS4A01G000200.1	Wheat	mitochondrion	48.18	55.77
GSMUA_Achr7P04660_001	Banana	golgi, mitochondrion	59.12	55.23
Zm00001d024540_P001	Maize	mitochondrion	52.55	54.82
TraesCS4B01G000200.1	Wheat	mitochondrion	48.18	54.7
EES13390	Sorghum	mitochondrion	52.55	54.55
TraesCS5B01G556400.1	Wheat	mitochondrion	48.42	53.64
HORVU4Hr1G000580.1	Barley	plasma membrane	49.15	53.58
TraesCS4D01G000200.3	Wheat	mitochondrion	48.42	53.35
TraesCS5D01G552400.1	Wheat	mitochondrion	48.66	53.19
TraesCS4A01G322100.1	Wheat	mitochondrion	45.26	51.81
Zm00001d049533_P001	Maize	plastid	49.88	51.38
TraesCS1B01G457000.1	Wheat	mitochondrion	35.52	43.07
HORVU7Hr1G088720.8	Barley	extracellular, golgi	21.65	38.7
TraesCS1B01G457600.1	Wheat	mitochondrion	21.17	35.37
TraesCS1B01G458900.2	Wheat	mitochondrion	21.17	35.37
Os08t0161100-00	Rice	cytosol	18.73	34.84
HORVU1Hr1G049770.3	Barley	plastid	10.95	21.33
HORVU2Hr1G107420.2	Barley	plastid	9.49	19.21

Protein Annotations

Gene3D:3.30.479.30	MapMan:35.2	EntrezGene:828868	UniProt:A0A178UVT3	ProteinID:AEE85360.1	EMBL:AK226211
ArrayExpress:AT4G27585	EnsemblPlantsGene:AT4G27585	RefSeq:AT4G27585	TAIR:AT4G27585	RefSeq:AT4G27585-TAIR-G	EnsemblPlants:AT4G27585.1
TAIR:AT4G27585.1	EMBL:AY034924	EMBL:AY059109	EMBL:AY086050	Unigene:At.20928	InterPro:Band_7
InterPro:Band_7/SPFH_dom_sf	InterPro:Band_7_C	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008270	GO:GO:0009987
GO:GO:0016020	GO:GO:0016043	GO:GO:0097250	RefSeq:NP_567778.1	ProteinID:OAO97725.1	PFAM:PF01145
PFAM:PF16200	PO:PO:0000293	PO:PO:0005052	PO:PO:0009025	PRINTS:PR00721	PANTHER:PTHR43327
PANTHER:PTHR43327:SF10	UniProt:Q93VP9	SMART:SM00244	SUPFAM:SSF117892	InterPro:Stomatin_fam	UniParc:UPI000009EB9D
SEG:seg	:	:	:	:	:

Description

SPFH/Band 7/PHB domain-containing membrane-associated protein family [Source:UniProtKB/TrEMBL;Acc:Q93VP9]

Coordinates

chr4:-:13766699..13769961

Molecular Weight (calculated)

45022.7 Da

IEP (calculated)

6.810

GRAVY (calculated)

-0.322

Length

411 amino acids

Sequence
(BLAST)

001: MNHLVRKSSV GYSALRSVSY LRQSAVTSPP PIFSAAASTV RQFTSAGYPS NSFQLTPPTN WGIRIVPERK AFVIERFGKY ATTLPSGIHF LIPFVDRIAY
101: VHSLKEEAIP IPNQTAITKD NVSIHIDGVL YVKIVDPKLA SYGVESPIYA VVQLAQTTMR SELGKITLDK TFEERDTLNE KIVEAINVAA KDWGLQCLRY
201: EIRDIMPPHG VRAAMEMQAE AERKKRAQIL ESEGERQSHI NIADGKKSSV ILASEAAKMD QVNRAQGEAE AILARAQATA KGLVLLSQSL KETGGVEAAS
301: LRVAEQYITA FGNIAKEGTI MLLPSGASNP ASMIAQALTM YKSLVINGPS KDHQETQALD ETDLEELEDM GEKHISEGSN NRSGSISFDT EKPGHTGEPR
401: FSLQNRNKDP Q

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.